Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01851 ATGGACAGTCAAGCGGACACTCAACCGGACCTTCCTCAAACGCCAGCCAAAAGGCACAAGTGTGCAGCATGCTACAGGCAATATAAGAAAAGGGAACATCTCATGGAGCACATGAAAATGTCATACCACTCAGTTCATCAGCCTAAATGTGGGGTCTGTCAAAAGCACTGCAAATCTTTTGAATCTCTGAGGGAACACCTTATTGGTCCATTGCCGAAAGGAAATTGTTCTGAGCACTTTTCTCAATATGGTTGCCCACTTTGCTTAAAATTATTTGATAGCCCCACAGCTCTTATCGAGCATAAAGAGATATGTTATCTATCTGCACCTACTCCTCTGGGAACGGAGCCATTAACCAATATAAGATCTCCAAAGCATTGTTCAGATTATTCTGATGAAAACCACACTGGAAGGCCCCCTGGAGCAATTGCAATTGATTGTGAAATGGTTGGTGGTGGAAGTGATGGAACCATAGATCTTTGTGCTAGAGTGTGCATGGTTGATGAAGATGAGAATTTAATTTTCCATACCTATGTGCAGCCTCAAATCCCAGTTACTAACTATAGATATGATATCACAGGGTTGACAGAAGAGCATCTCAGAGATGCCATGCCACTCAAGGAAGTCCAAGAAAAGGTATTGGAAATTTTGTACAATGGAGAATCAATTGGCAAAGTTAGATTGGATGGAGGAAAGGCCAAGCTTCTTGTGGGGCATGATCTAGAACATGATTTGGACTGTCTCAATTTGACTTATCCTGGCCATATGTTGAGGGACACTGCAAAGTATCGTCCATTGATGAAAACAAACTTGGTCAGCCATTCGCTTAAGTACCTTACTCGAACATATTTAGGTTATGACATCCAGACAGACACACATGACCCTTTTGAAGACTGTGTTTCCGTGATGAGGTTGTACAAGAGAATCCGAGGCCAAGTTCATACGGAGGAAAACTTCAGAGCATTTACTCCAAGTAGCGTCACCAGCAATTCTGATTCTTGGAATTCCAAGGAACTTGAGAACTGTACACCAGATGAACTCTTTGCCATGTCAAAGTCAGACTATAAGTGCTGGTGTTCAGATTCCATGTAG 1092 0.424 MDSQADTQPDLPQTPAKRHKCAACYRQYKKREHLMEHMKMSYHSVHQPKCGVCQKHCKSFESLREHLIGPLPKGNCSEHFSQYGCPLCLKLFDSPTALIEHKEICYLSAPTPLGTEPLTNIRSPKHCSDYSDENHTGRPPGAIAIDCEMVGGGSDGTIDLCARVCMVDEDENLIFHTYVQPQIPVTNYRYDITGLTEEHLRDAMPLKEVQEKVLEILYNGESIGKVRLDGGKAKLLVGHDLEHDLDCLNLTYPGHMLRDTAKYRPLMKTNLVSHSLKYLTRTYLGYDIQTDTHDPFEDCVSVMRLYKRIRGQVHTEENFRAFTPSSVTSNSDSWNSKELENCTPDELFAMSKSDYKCWCSDSM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01851 363 SMART exoiiiendus 141 315 IPR013520 -
Accr2g01851 363 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 22 314 IPR047021 GO:0004527
Accr2g01851 363 Gene3D - 140 322 IPR036397 GO:0003676
Accr2g01851 363 SUPERFAMILY Ribonuclease H-like 143 310 IPR012337 -
Accr2g01851 363 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 48 IPR013087 -
Accr2g01851 363 CDD REX4_like 143 307 IPR037431 GO:0006364|GO:0008408
Accr2g01851 363 Gene3D Classic Zinc Finger 1 69 - -
Accr2g01851 363 ProSitePatterns Zinc finger C2H2 type domain signature. 21 43 IPR013087 -
Accr2g01851 363 Pfam Exonuclease 143 306 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01851 Accr-Chr2 52588421 52591541 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01851 6 363 C2H2 Transcription Factor Family AT3G27970 53.203 2.22e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01851 K18327 - gmx:100805841 572.392