Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01841 ATGAAGGAGAAGGCAGATTCCCCTGTTGGGATTCTTGAGGACTACTTTAAGAGCTCTGAATCAGACACAAGTTCTTCGAAAGAACCCACCGTGGATTCTGAGGCTCAAGATAAGTCAAAATTTGGTTCTAAATGGCGTGGATTTCTGCAAAATCTGACCAACAGATCTAAAAAACCCGTACCCACCACCATGCAACCTCCTCCTCTTAGTATGTTCAAGCTGTCTAAGAGAATGAGCAGAAGCATGAGAGAGACCATATTTCCAAGTTCACGCTTAGGGGCAGATTCGTCTCTCCAAAATTCACCATGGAAGATCTTCACTCACAGGGAAATTCTACTTGCGACAAGTTCTTTCAGTCAAGAAAACCTTATTGGGAAAGGTGGGTATGCTGAAGTTTACAAAGGGTGTTTGCCAAATGGTCATCTAGTAGCAATTAAAAAGCTGACACGTGGAAGCCAAGATGATATTATAGGTGACTTCTTATCAGAACTTGGCATAATGGCACATGTTAATCACCCCAATACGGCGAAGTTAGTTGGCTATGGCGTTGAAGGAGGCATGCACCTTGTTCTTGAGTTCTCTGAAAAAGGAAGCTTAGCTTCAGTACTTCATGGTACCAAGGAAAATTTGCCATGGTGTATTAGGTATAACATAGCTTTAGGAACAGCCAAGGGCATATTATATCTCCACGAGGGTTGTCAAAGAAGAATTATCCACAGAGATATAAAGGCAGCGAATATCTTACTCACAGAGGATTATGAGCCACAGGTTTGTGATTATGGATTAGCAAAATGGCTGCCTGAGAACTGGACTCACCACACCGTTTCAAAATTTGAAGGAACCTTTGGTTATCTTGCTCCTGAGTACTTGCTTCATGGCATAGTAGACGAGAAAACAGATGTATTTGCTTTCGGTGTTCTGCTATTAGAATTGGTCACTGGTAGGCGAGCCCTTAATTATTCACAGCAAAGCCTTGTCTTGTGGGCAAAACCATTGTTGAAAAAGAACAGAATGAGGGAGCTGATAGATCCATCGCTAGGGGATGCTTTTGATACTCGGCAGATGAATCTTGTACTATTGGTCGCTTCTTTGTGTATACACCAGTCCCCCATTCGCAGACCCTCCATGAGACAGATTGTGCAGCTTCTAAATGGTAATCTTAGCAGCTTTAAGAGCATGAAGAAGAGTCGATTGCCATTTTTCAGAAAGCTCTTCGAGGAAGAGCTCCTTGATTCTGAATAG 1242 0.4259 MKEKADSPVGILEDYFKSSESDTSSSKEPTVDSEAQDKSKFGSKWRGFLQNLTNRSKKPVPTTMQPPPLSMFKLSKRMSRSMRETIFPSSRLGADSSLQNSPWKIFTHREILLATSSFSQENLIGKGGYAEVYKGCLPNGHLVAIKKLTRGSQDDIIGDFLSELGIMAHVNHPNTAKLVGYGVEGGMHLVLEFSEKGSLASVLHGTKENLPWCIRYNIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEDYEPQVCDYGLAKWLPENWTHHTVSKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVLLLELVTGRRALNYSQQSLVLWAKPLLKKNRMRELIDPSLGDAFDTRQMNLVLLVASLCIHQSPIRRPSMRQIVQLLNGNLSSFKSMKKSRLPFFRKLFEEELLDSE 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01841 413 SUPERFAMILY Protein kinase-like (PK-like) 103 401 IPR011009 -
Accr2g01841 413 Pfam Protein kinase domain 119 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01841 413 ProSiteProfiles Protein kinase domain profile. 118 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01841 413 Gene3D Phosphorylase Kinase; domain 1 80 193 - -
Accr2g01841 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Accr2g01841 413 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK2 89 192 - -
Accr2g01841 413 SMART serkin_6 118 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01841 413 PANTHER OS08G0249100 PROTEIN 5 408 IPR046958 -
Accr2g01841 413 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Accr2g01841 413 Gene3D Transferase(Phosphotransferase) domain 1 195 400 - -
Accr2g01841 413 MobiDBLite consensus disorder prediction 1 42 - -
Accr2g01841 413 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 195 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01841 Accr-Chr2 52467801 52469740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01841 106 385 Receptor kinase-like Gene Family AT1G53420 41.319 2.44e-67 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Accr2g01841 Pkinase 5.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01841 - - gmx:100780587 644.425