Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01816 ATGAGGCGCCACAAGAGGATGAGCGGTATGGCTGCTGCTGCGAACAAAGCGTCACCAGCGAATCACTCCCCAAAAAATGGCGACGGAACTCCGACATGTAACTATGGCGGACTCTCCGGGGAAGGCGAGGAAGATGTTTTGAATGATTCACTGTGGCAAGCATGCGCCGGTTCTTCTGTCGTTGTTCCTCGCGCTGGGGACTTGGTCTTCTACTTTCCCCAAGGCCACTTGGAACAGGTGGCTGACTTTACTTGCCAGGATGGTCACATGGAACTTCCTGCTAGTGATTTGCCTTCTAAAATCCTTTGCAGGGTCATGAGTGTTCAACTCAAGGCTGAAGCCAACACAGACGAGGTTTTCGCTCAAATTACTTTAATTCCTGAGTCAAAGCTAGATGAAGTTAGTTCAGACGATAAAGAGTCTCGACCAAAACCCAGAACTACTTCCAGGTGCTTTAGTAAGACGCTCACCCTATCAGATACAGGTGCACATGGTGGATTCTCCATTCCTAAGAAACTGGCCGAGGAATGCTTCCCAACTCTGGATATGTCTCAGCAACCACCAGGACAAGAGCTTGTTGCGAAGGACCTGCATGGTGTTATATGGACTTTTCGGCATACCTATCGGGGTCAGCCGAAACGACATCTGCTTACTGGTGGCTGGAGTTCATTCCTCCATTCAAAAAAGCTTGAACCCGGAGATACATGCATTTTTCTTTGCGGAGAAAATAGAGAACTTGGCATCGGGATCCGTCGAGCACTTAAACAAAACAACAGAGCATCCACATGCGTGATATCTGGCCATAGCATGCTACTCGGGTTATTAGCCACTGCTTCTTATGCCGTTGCTACTGGATCCAGGTTTACTGTCTACTACCGTCCTTGGACTTGTTCCTCTGAATTCATTGTTCCGCTGAGTCAATACATGAAGTCAAATAAAATGAAATATTCATGTGGAATCAGGATACAAATGGAGTTTGAAACCGAAGAATCTACAAGAAGGTATCCAGGAACCATAATAGGTATTGATGATATTGATGGCATGAGGTGGCCCAATTCAGAATGGAGATGTCTCAAGGTGAAATGGGACGCGACGCTTGATATAGATTTGCGTCCAGAAAGGGTTAGTCCTTGGAACATTGAACTCTTGGAATCTTCCGGGAAGAACATTCCTAATCTAGCCCCACCAAAGAGGCCACGCCTACTTGGCCCATCAATGTCTGGATTATTCGATCTTACCAAGGATGATATCGATCTGAACTCAGCCAACACTGCTTCTCGGAGATGTGAAAGGGACTTACAAGGTCAAGATAACAAAGAAGTGGGCTTCCAACAATATGACTCTCAGTTCAGGACGAAGAATCAACCGCACTTTCAACTGAAAATCCCTCCTTGCAGTTCTCTTGGCGGCTCAGCAACATTTCCAGATGATGACATTTCAACTTCAAGCCCCCACAAACAGCCCCCAATCCCAACCACTAATGACGCATGCAATGATGTCCCCGTCACCAAGTACCATTCACTCTCAAATGTGAACTCCAATGATTCTGAATCCCATGGATGTCGGGCCTCTGATTCAAGGGATGAGAATGATAGTAAAACTGAATGCAAGCTTTTCGGGTCAAGCGTTTCTGCAATCCCGGTTTCAAAACTATCAAAGGGTATTTCAGATGTTACGTCGCAGAAAAAATGCAAATGCAGCTCTGTCAATAGTAGGACTTGCACAAAGGTGCTCAAGCGTGGAAGTGCACTTGGTAGATCAATTGACCTCTCGCGTATCACTGGATACAATGACCTCATTTCTGAACTGGACTTGATGTTTGATTTCAAAGGAAGCTTAATAAATGGAAGCAGCGGATGGCATGTTGTCCCCATGGATGATGACGGGGATATGATGCTGTTTGGAGATTTCCCGTGGCAGGATTTTCAGTCCATGGTGCAAAAGATGATCATTTGTCCAAAGGAGGACTCCAACAACCGGAGTGCTATTGCTGGCACAGCAGACTCAACAACCCTGTAA 2019 0.4626 MRRHKRMSGMAAAANKASPANHSPKNGDGTPTCNYGGLSGEGEEDVLNDSLWQACAGSSVVVPRAGDLVFYFPQGHLEQVADFTCQDGHMELPASDLPSKILCRVMSVQLKAEANTDEVFAQITLIPESKLDEVSSDDKESRPKPRTTSRCFSKTLTLSDTGAHGGFSIPKKLAEECFPTLDMSQQPPGQELVAKDLHGVIWTFRHTYRGQPKRHLLTGGWSSFLHSKKLEPGDTCIFLCGENRELGIGIRRALKQNNRASTCVISGHSMLLGLLATASYAVATGSRFTVYYRPWTCSSEFIVPLSQYMKSNKMKYSCGIRIQMEFETEESTRRYPGTIIGIDDIDGMRWPNSEWRCLKVKWDATLDIDLRPERVSPWNIELLESSGKNIPNLAPPKRPRLLGPSMSGLFDLTKDDIDLNSANTASRRCERDLQGQDNKEVGFQQYDSQFRTKNQPHFQLKIPPCSSLGGSATFPDDDISTSSPHKQPPIPTTNDACNDVPVTKYHSLSNVNSNDSESHGCRASDSRDENDSKTECKLFGSSVSAIPVSKLSKGISDVTSQKKCKCSSVNSRTCTKVLKRGSALGRSIDLSRITGYNDLISELDLMFDFKGSLINGSSGWHVVPMDDDGDMMLFGDFPWQDFQSMVQKMIICPKEDSNNRSAIAGTADSTTL 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01816 672 FunFam Auxin response factor 315 386 - -
Accr2g01816 672 SUPERFAMILY DNA-binding pseudobarrel domain 147 259 IPR015300 -
Accr2g01816 672 CDD B3_DNA 150 252 IPR003340 GO:0003677
Accr2g01816 672 MobiDBLite consensus disorder prediction 462 531 - -
Accr2g01816 672 Gene3D - 150 254 IPR015300 -
Accr2g01816 672 SMART B3_2 152 254 IPR003340 GO:0003677
Accr2g01816 672 Gene3D - 315 389 - -
Accr2g01816 672 FunFam Auxin response factor 150 254 - -
Accr2g01816 672 Gene3D - 567 661 - -
Accr2g01816 672 ProSiteProfiles B3 DNA-binding domain profile. 152 254 IPR003340 GO:0003677
Accr2g01816 672 MobiDBLite consensus disorder prediction 19 33 - -
Accr2g01816 672 ProSiteProfiles PB1 domain profile. 572 654 IPR000270 GO:0005515
Accr2g01816 672 MobiDBLite consensus disorder prediction 1 36 - -
Accr2g01816 672 MobiDBLite consensus disorder prediction 473 519 - -
Accr2g01816 672 Pfam Auxin response factor 278 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr2g01816 672 SUPERFAMILY CAD & PB1 domains 569 648 - -
Accr2g01816 672 Pfam B3 DNA binding domain 152 252 IPR003340 GO:0003677
Accr2g01816 672 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 45 658 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01816 Accr-Chr2 52180217 52186448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01816 45 656 B3 DNA Binding Superfamily AT1G59750 40.351 1.11e-145 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr2g01816 B3 4.1e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01816 - - pcin:129286310 1098.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01816 2 52180217 52186448 Accr2g01816 2 52180217 52186448 ECH