Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01815 ATGAGGCGCCACAAGAGGATGAGCGGTATGGCTGCTGCTGCGAACAAAGCGTCACCAGCGAATCACTCCCCAAAAAATGGCGACGGAACTCCGACATGTAACTATGGCGGACTCTCCGGGGAAGGCGAGGAAGATGTTTTGAATGATTCACTGTGGCAAGCATGCGCCGGTTCTTCTGTCGTTGTTCCTCGCGCTGGGGACTTGGTCTTCTACTTTCCCCAAGGCCACTTGGAACAGGTGGCTGACTTTACTTGCCAGGATGGTCACATGGAACTTCCTGCTAGTGATTTGCCTTCTAAAATCCTTTGCAGGGTCATGAGTGTTCAACTCAAGGCTGAAGCCAACACAGACGAGGTTTTCGCTCAAATTACTTTAATTCCTGAGTCAAAGCTAGATGAAGTTAGTTCAGACGATAAAGAGTCTCGACCAAAACCCAGAACTACTTCCAGGTGCTTTAGTAAGACGCTCACCCTATCAGATACAGGTGCACATGGTGGATTCTCCATTCCTAAGAAACTGGCCGAGGAATGCTTCCCAACTCTGGATATGTCTCAGCAACCACCAGGACAAGAGCTTGTTGCGAAGGACCTGCATGGTGTTATATGGACTTTTCGGCATACCTATCGGGGTCAGCCGAAACGACATCTGCTTACTGGTGGCTGGAGTTCATTCCTCCATTCAAAAAAGCTTGAACCCGGAGATACATGCATTTTTCTTTGCGGAGAAAATAGAGAACTTGGCATCGGGATCCGTCGAGCACTTAAACAAAACAACAGAGCATCCACATGCGTGATATCTGGCCATAGCATGCTACTCGGGTTATTAGCCACTGCTTCTTATGCCGTTGCTACTGGATCCAGGTTTACTGTCTACTACCGTCCTTGGACTTGTTCCTCTGAATTCATTGTTCCGCTGAGTCAATACATGAAGTCAAATAAAATGAAATATTCATGTGGAATCAGGATACAAATGGAGTTTGAAACCGAAGAATCTACAAGAAGGTATCCAGGAACCATAATAGGTATTGATGATATTGATGGCATGAGGTGGCCCAATTCAGAATGGAGATGTCTCAAGGTGAAATGGGACGCGACGCTTGATATAGATTTGCGTCCAGAAAGGGTTAGTCCTTGGAACATTGAACTCTTGGAATCTTCCGGGAAGAACATTCCTAATCTAGCCCCACCAAAGAGGCCACGCCTACTTGGCCCATCAATGTCTGGATTATTCGATCTTACCAAGGATGATATCGATCTGAACTCAGCCAACACTGCTTCTCGGAGATGTGAAAGGGACTTACAAGGTCAAGATAACAAAGAAGTGGGCTTCCAACAATATGACTCTCAGTTCAGGACGAAGAATCAACCGCACTTTCAACTGAAAATCCCTCCTTGCAGTTCTCTTGGCGGCTCAGCAACATTTCCAGATGATGACATTTCAACTTCAAGCCCCCACAAACAGCCCCCAATCCCAACCACTAATGACGCATGCAATGATGTCCCCGTCACCAAGTACCATTCACTCTCAAATGTGAACTCCAATGATTCTGAATCCCATGGATGTCGGGCCTCTGATTCAAGGGATGAGAATGATAGTAAAACTGAATGCAAGCTTTTCGGGGTAAGCTTAAACCACCCGGAGCTCCCTTCACCACAAGTTGCTGCTTCTAGCAGTACTTCAACCCTTCATGTTCCTCCAATGTCTCAGTCAAGCGTTTCTGCAATCCCGGTTTCAAAACTATCAAAGGGTATTTCAGATGTTACGTCGCAGAAAAAATGCAAATGCAGCTCTGTCAATAGTAGGACTTGCACAAAGGTGCTCAAGCGTGGAAGTGCACTTGGTAGATCAATTGACCTCTCGCGTATCACTGGATACAATGACCTCATTTCTGAACTGGACTTGATGTTTGATTTCAAAGGAAGCTTAATAAATGGAAGCAGCGGATGGCATGTTGTCCCCATGGATGATGACGGGGATATGATGCTGTTTGGAGATTTCCCGTGGCAGGATTTTCAGTCCATGGTGCAAAAGATGATCATTTGTCCAAAGGAGGACTCCAACAACCGGAGTGCTATTGCTGGCACAGCAGACTCAACAACCCTGTAA 2106 0.4639 MRRHKRMSGMAAAANKASPANHSPKNGDGTPTCNYGGLSGEGEEDVLNDSLWQACAGSSVVVPRAGDLVFYFPQGHLEQVADFTCQDGHMELPASDLPSKILCRVMSVQLKAEANTDEVFAQITLIPESKLDEVSSDDKESRPKPRTTSRCFSKTLTLSDTGAHGGFSIPKKLAEECFPTLDMSQQPPGQELVAKDLHGVIWTFRHTYRGQPKRHLLTGGWSSFLHSKKLEPGDTCIFLCGENRELGIGIRRALKQNNRASTCVISGHSMLLGLLATASYAVATGSRFTVYYRPWTCSSEFIVPLSQYMKSNKMKYSCGIRIQMEFETEESTRRYPGTIIGIDDIDGMRWPNSEWRCLKVKWDATLDIDLRPERVSPWNIELLESSGKNIPNLAPPKRPRLLGPSMSGLFDLTKDDIDLNSANTASRRCERDLQGQDNKEVGFQQYDSQFRTKNQPHFQLKIPPCSSLGGSATFPDDDISTSSPHKQPPIPTTNDACNDVPVTKYHSLSNVNSNDSESHGCRASDSRDENDSKTECKLFGVSLNHPELPSPQVAASSSTSTLHVPPMSQSSVSAIPVSKLSKGISDVTSQKKCKCSSVNSRTCTKVLKRGSALGRSIDLSRITGYNDLISELDLMFDFKGSLINGSSGWHVVPMDDDGDMMLFGDFPWQDFQSMVQKMIICPKEDSNNRSAIAGTADSTTL 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01815 701 MobiDBLite consensus disorder prediction 547 575 - -
Accr2g01815 701 Gene3D - 150 254 IPR015300 -
Accr2g01815 701 Pfam Auxin response factor 278 359 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Accr2g01815 701 CDD B3_DNA 150 252 IPR003340 GO:0003677
Accr2g01815 701 Pfam B3 DNA binding domain 152 252 IPR003340 GO:0003677
Accr2g01815 701 FunFam Auxin response factor 150 254 - -
Accr2g01815 701 Gene3D - 315 389 - -
Accr2g01815 701 SMART B3_2 152 254 IPR003340 GO:0003677
Accr2g01815 701 ProSiteProfiles PB1 domain profile. 601 683 IPR000270 GO:0005515
Accr2g01815 701 MobiDBLite consensus disorder prediction 463 532 - -
Accr2g01815 701 FunFam Auxin response factor 315 386 - -
Accr2g01815 701 ProSiteProfiles B3 DNA-binding domain profile. 152 254 IPR003340 GO:0003677
Accr2g01815 701 MobiDBLite consensus disorder prediction 19 33 - -
Accr2g01815 701 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 46 687 IPR044835 GO:0003677|GO:0006355|GO:0009725
Accr2g01815 701 MobiDBLite consensus disorder prediction 1 36 - -
Accr2g01815 701 MobiDBLite consensus disorder prediction 473 519 - -
Accr2g01815 701 Gene3D - 596 690 - -
Accr2g01815 701 SUPERFAMILY CAD & PB1 domains 598 677 - -
Accr2g01815 701 MobiDBLite consensus disorder prediction 549 575 - -
Accr2g01815 701 SUPERFAMILY DNA-binding pseudobarrel domain 147 259 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01815 Accr-Chr2 52180217 52186448 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01815 591 685 B3 DNA Binding Superfamily AT5G62000 47.368 1.33e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Accr2g01815 B3 4.4e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01815 - - pcin:129286310 1167.14