Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01806 ATGAGTGATTCTCCGAAGCACCCAAATCTTCCGGATAAAGATCAAGCGCCGAAAGCTCAAAGGCCATGCGACTACTGCGGCGACTCCACTGGTATTCTCTACTGTCGAGCTGATTCTGCGAAGCTATGTTTCTCTTGTGATCGTGAAGTTCACTCTACCAACCAACTCTTCTCGAAGCACACTCGAGCTCTGCTCTGTGATGCCTGCGACAATTCGCCGGCCACAATACTATGTTCTACGGAAAGCTCCGTTTTTTGCCAGAATTGTGATTGGGAACGGCACAACCTTTCGCTGTCTGTGGTGCACGATAGGAGGCCACTCGAGGGCTTCACTGGCTGTCCTTCCGTCAGTGAGTTGTTATCGATTCTAGGTTTTGAAGATTTGGGCAAGAAAGCCCTGGTTTCGACTGAGGATTGTGGAGGATGTGGCGGCGGCAGTGGCGATGGGGTAGTGGGATCTGAGCTTGGAGAGGGCCTTTGGGATTTGTTGGTATGGGATGCTCCTGCTGTTGTTAGCCTTGACGATTTGATAACGTCTACGAGCTCGTCTCACAATTATCAGGCCATGGAGGTTCCTCCTCTGCCTAAGAATCGTAAGGCTGCTTGTGGGCAACACAAGGAAGAAATCATTAGTCAGCTTCGTGAGCTAGCACAATCGGAGCCCGGCTTGAATGTTGGAGATGTAGATACTGAACGACTGAGCTCCAAGCACCCCATAGTTCCTGAACATTATTTACGGTCGTCAAGCTTGTCCACAGGTTTTGAACGTGAATTCGAGGCTGATGTTTTTCCTTCGCGTGAGACAAGTGTTTTTGAGGGGCCTAGAGACAGTGAGACTAATCAAGTGGTTCCTCCTAACACATCGTTGTATAAAGAGGAAGTTGTTGACATACATTCAGCTTCCCCTAGCTGTGGGAGTCATACCTATCTTAACAATGGTGGACAACTGCCAAACTCTTTTAACTCTGAAAACTCGTCGACCACTCCGAAAGCTGCTTCATATGAGCTGACAAGTCAAGAAAGGGACTCTGCATTATTACGTTACAAGGAGAAGAAGAAAACAAGAAGATATGACAAGCACATAAGGTATGAATCACGAAAAGTTCGGGCAGAAAGCAGGACAAGAATCAAGGGTCGTTTTGCTAAGATTGAACACTGA 1158 0.4767 MSDSPKHPNLPDKDQAPKAQRPCDYCGDSTGILYCRADSAKLCFSCDREVHSTNQLFSKHTRALLCDACDNSPATILCSTESSVFCQNCDWERHNLSLSVVHDRRPLEGFTGCPSVSELLSILGFEDLGKKALVSTEDCGGCGGGSGDGVVGSELGEGLWDLLVWDAPAVVSLDDLITSTSSSHNYQAMEVPPLPKNRKAACGQHKEEIISQLRELAQSEPGLNVGDVDTERLSSKHPIVPEHYLRSSSLSTGFEREFEADVFPSRETSVFEGPRDSETNQVVPPNTSLYKEEVVDIHSASPSCGSHTYLNNGGQLPNSFNSENSSTTPKAASYELTSQERDSALLRYKEKKKTRRYDKHIRYESRKVRAESRTRIKGRFAKIEH 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01806 385 MobiDBLite consensus disorder prediction 1 21 - -
Accr2g01806 385 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 22 382 - -
Accr2g01806 385 Pfam CCT motif 341 382 IPR010402 GO:0005515
Accr2g01806 385 ProSiteProfiles Zinc finger B-box type profile. 18 65 IPR000315 GO:0008270
Accr2g01806 385 MobiDBLite consensus disorder prediction 306 335 - -
Accr2g01806 385 ProSiteProfiles Zinc finger B-box type profile. 61 107 IPR000315 GO:0008270
Accr2g01806 385 Pfam B-box zinc finger 64 106 IPR000315 GO:0008270
Accr2g01806 385 Pfam B-box zinc finger 20 62 IPR000315 GO:0008270
Accr2g01806 385 CDD Bbox1_BBX-like 22 65 - -
Accr2g01806 385 ProSiteProfiles CCT domain profile. 341 383 IPR010402 GO:0005515
Accr2g01806 385 SMART bboxneu5 66 107 IPR000315 GO:0008270
Accr2g01806 385 SMART bboxneu5 18 65 IPR000315 GO:0008270
Accr2g01806 385 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01806 Accr-Chr2 52031042 52033033 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01806 12 356 C2C2-CO-like Transcription Factor Family AT2G47890 40.286 1.86e-75 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Accr2g01806 CCT 1.6e-15 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01806 - - pcin:129296118 634.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01806 2 52031042 52033033 Accr2g01806 2 52031042 52033033 ECH