Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01804 ATGGAAGGCCCTTCAACGCAAAACAGAGAGCACTTTGGGAAGTTGCAGTATGGATGCGAGCACTACGAGAGAAGGTGCAAAATTCGAGCTCCCTGCTGTGACCAGATCTTCCCATGTCGCCACTGCCACAACGAGGCCATGAGCTTGCTCGACAACCCCAAAGAGCACCATGAACTGGTCAGGCGTGATGTTAAGCAGGTTATATGTTCAGTCTGTGATGCTGAGCAGGAGGTTGCCAAAGTGTGTTCTAACTGTGGTGTCAACATGGGAGAATATTATTGCGAGATCTGCAAATTCTATGATGATGATACAGATAAAGGACAATTCCATTGCGAGGAATGTGGTATTTGCAGGGTTGGTGGTCGTGATAACTACTTTCATTGTCAGAAATGTGGATCATGCTATGCGGTGGACCTGAAAAATAATCACTCATGTGTAGAGAACTCAATGAAGAGCCACTGCCCCGTCTGCTATGAGTATCTGTTTGATTCAATTAAAGGCACCACAATTATGAAGTGTGGACATGCAATGCATATGGAATGCTGTCAAGAGATGGCAGCCCAAAATCAGTATCGTTGTCCTGTCTGCTTGAAGTCAATATTCGATATGTCAGAGAATTGGAGAAATCTAGATCTTGAGATTGAAGCTGTTTCGATGCCTCTGGAGTGTAGGATTGAGGTCTCGATTCTGTGCAACGATTGCAATACCACCAGCAAAGTGTGGTTTCATATTTTAGGTCACAAGTGCAGCCAGTGCGGTTCCTACAACACCTGTAGGATTTCAGCACCAGAAGATAAGTGA 801 0.4507 MEGPSTQNREHFGKLQYGCEHYERRCKIRAPCCDQIFPCRHCHNEAMSLLDNPKEHHELVRRDVKQVICSVCDAEQEVAKVCSNCGVNMGEYYCEICKFYDDDTDKGQFHCEECGICRVGGRDNYFHCQKCGSCYAVDLKNNHSCVENSMKSHCPVCYEYLFDSIKGTTIMKCGHAMHMECCQEMAAQNQYRCPVCLKSIFDMSENWRNLDLEIEAVSMPLECRIEVSILCNDCNTTSKVWFHILGHKCSQCGSYNTCRISAPEDK 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01804 266 Gene3D - 225 264 - -
Accr2g01804 266 Pfam Zinc finger, C3HC4 type (RING finger) 154 196 IPR018957 GO:0046872
Accr2g01804 266 SUPERFAMILY Zinc hairpin stack 90 147 IPR037275 -
Accr2g01804 266 SUPERFAMILY CHY zinc finger-like 15 88 IPR037274 GO:0008270
Accr2g01804 266 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 149 217 IPR013083 -
Accr2g01804 266 SMART ring_2 154 196 IPR001841 -
Accr2g01804 266 ProSiteProfiles Zinc finger CHY-type profile. 12 87 IPR008913 GO:0008270
Accr2g01804 266 ProSiteProfiles Zinc finger RING-type profile. 154 196 IPR001841 -
Accr2g01804 266 ProSiteProfiles Zinc finger CTCHY-type profile. 89 153 IPR017921 -
Accr2g01804 266 Pfam CHY zinc finger 19 99 IPR008913 GO:0008270
Accr2g01804 266 SUPERFAMILY RING/U-box 153 201 - -
Accr2g01804 266 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 10 264 - -
Accr2g01804 266 Pfam Zinc-ribbon 201 258 IPR039512 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01804 Accr-Chr2 52012752 52015790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01804 3 262 C2H2 Transcription Factor Family AT3G18290 40.075 4.27e-52 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01804 K10144 - qsa:O6P43_007118 476.478