Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01791 ATGGAGCTGTACGGTCGGAATCCGGCTAGGAATGGGTCGCAACCCGGTAATCAATCTGAATGGCACCCGTCAGGCGGCGAGACTGGGCTTGAAGAATCGATGTGGCACTTAACCATCGGTGGCAGCGAATCTTACCCGGAGCGACCCGGCGCACCCAATTGTGTGTATTATATGCGAACCGGCTTCTGTGGATACGGTAGCAGGTGCCGTTACAATCATCCTCGTGATCGTGCCGCGGTTGCAGCAGCTGTGAGGGCTACAGGGGAGTACCCAGAACGAGTGGGGGAACCTTCATGCCAGTATTATTTAAAAACGGGAACCTGCAAATTTGGTGCATCTTGTAGATTTCACCATCCAAAACACGGAGGTGGATCATTAAGTCAAGCTCCACTGAATATTTATGGATACCCGTTACGTCTGGGTGAGAAAGAATGCTCCTACTATTTGAAGACGGGGCAGTGCAAATTTGGTATAACTTGTAAATTCCATCATCCTCAGCCAGCTGGCACATCAATGCCAGCATCTGCACCTCAGTTTTATCAACAGGTGCAGTCTCCTACAGTCCCTCTAGCCGAACAGTATGGGGGGGCATCCAACAGTTTGAGAGTGGCTAGGCCTTCAATATTGCCTGGTTCATATGTGCAAGGGGCTTATGGTACCGTCCTACTTTCTCCAGGGGTCGTTCCCTTTCCAGGATGGAGTCCGTATACGGCGCCTGTGAGTCCTGGGTTATCTCCTGGTGCTCAGTCTGCTGTTGGGGCTACTTCTCTGTATGGAGTGACCCAGTTGTCTTCATCAACATCAGCTTTTGCTAGACCGTATACTCCTCTTCCATCTACTACTGGCCTTCCAGGCAGTGGTCTGAAGGAACATATATTTCCTGAAAGACCTGGTGAACCTGAATGCCAATTCTATCTGAGAACGGGGGACTGCAAATATGGATTAGCATGTCGATTTCATCATCCCAGGGACCGGACAGTGACCCGGCCACTTCTCAGCCCCATTGGTCTTCCTTTACGTCCTTATGCTTGA 1032 0.5068 MELYGRNPARNGSQPGNQSEWHPSGGETGLEESMWHLTIGGSESYPERPGAPNCVYYMRTGFCGYGSRCRYNHPRDRAAVAAAVRATGEYPERVGEPSCQYYLKTGTCKFGASCRFHHPKHGGGSLSQAPLNIYGYPLRLGEKECSYYLKTGQCKFGITCKFHHPQPAGTSMPASAPQFYQQVQSPTVPLAEQYGGASNSLRVARPSILPGSYVQGAYGTVLLSPGVVPFPGWSPYTAPVSPGLSPGAQSAVGATSLYGVTQLSSSTSAFARPYTPLPSTTGLPGSGLKEHIFPERPGEPECQFYLRTGDCKYGLACRFHHPRDRTVTRPLLSPIGLPLRPYA 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01791 343 SUPERFAMILY CCCH zinc finger 97 120 IPR036855 GO:0046872
Accr2g01791 343 ProSiteProfiles Zinc finger C3H1-type profile. 139 167 IPR000571 GO:0046872
Accr2g01791 343 SMART c3hfinal6 93 120 IPR000571 GO:0046872
Accr2g01791 343 SMART c3hfinal6 296 323 IPR000571 GO:0046872
Accr2g01791 343 SMART c3hfinal6 139 166 IPR000571 GO:0046872
Accr2g01791 343 SMART c3hfinal6 48 75 IPR000571 GO:0046872
Accr2g01791 343 MobiDBLite consensus disorder prediction 1 27 - -
Accr2g01791 343 SUPERFAMILY CCCH zinc finger 300 325 IPR036855 GO:0046872
Accr2g01791 343 Gene3D - 47 125 - -
Accr2g01791 343 Gene3D - 289 332 - -
Accr2g01791 343 MobiDBLite consensus disorder prediction 10 24 - -
Accr2g01791 343 SUPERFAMILY CCCH zinc finger 140 167 IPR036855 GO:0046872
Accr2g01791 343 ProSiteProfiles Zinc finger C3H1-type profile. 48 76 IPR000571 GO:0046872
Accr2g01791 343 ProSiteProfiles Zinc finger C3H1-type profile. 296 324 IPR000571 GO:0046872
Accr2g01791 343 ProSiteProfiles Zinc finger C3H1-type profile. 93 121 IPR000571 GO:0046872
Accr2g01791 343 PANTHER PROTEIN PHOSPHATASE RELATED 25 342 - -
Accr2g01791 343 SUPERFAMILY CCCH zinc finger 53 77 IPR036855 GO:0046872
Accr2g01791 343 FunFam Zinc finger nuclease 2 47 124 - -
Accr2g01791 343 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 142 166 IPR000571 GO:0046872
Accr2g01791 343 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 96 120 IPR000571 GO:0046872
Accr2g01791 343 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 51 75 IPR000571 GO:0046872
Accr2g01791 343 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 298 323 IPR000571 GO:0046872
Accr2g01791 343 Gene3D - 126 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01791 Accr-Chr2 51878933 51881271 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01791 1 343 C2H2 Transcription Factor Family AT5G18550 51.247 1.79e-116 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr2g01791 zf-CCCH 8.6e-10 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01791 - - lja:Lj5g3v1665190.3 619.002