Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01789 ATGGCGGGAAGGAGGAAACCTCTGGTACTCGCCTCCACCAAGCAGCTCATCAATTCTGTGCTCAGCTCATCACAAGGTGGGGAAGCAACCCCTGGAGCTGGAGACAAGCTCTTCGATGACGGCTCTCCCAGGAATCTGCAGTTACCTGTCGGCATTCTCCGAATTTCCGAGGATGCAAACGAGAGACCAAAACCTCAATTGGCTGCTCTTTATGATTCTGCGTTGGTCGGCCTGTCAACTTCGTTTTTGAGAAGGCTTTCTATAACTTCGGGTTCACTGGTGCTTGTTAAGAATGTTGAGATGAACATACAGGGAGTAGCTCAGGCAGTTGCCCTAGATCCTCCTGGCAGTGATGAGTGCGCATCTGATGTTAAATTGCCCTCTCCCCCTATAATGCTTGTGTTTCCTTCTTGTGCTTTCCCTAATGGGGGCGTGTTAGGTCATGAAGTCGCTTATATATCTCCTCTCTTAGCTTTCAACCTCGGTTTGCACATAACATGCTTAGAATCCATTCTACACCAAGGGGAAGAGGTGTTAGCCTCTTATTTCGATCCAAAAGTGAATGACAAGGCTACTGCAAAAAGATATGAGACTTCTGTCGTTGATATAGAATTGGAACCTTTGGTTCAAGCTCCTAGGTATGCTTCACATCTAAGGGTTTCGTTTGTGAAGATACCAGAATGTGGTACCCTTGAAACCCTCAGAGGAATTTCACCTATGGAATCAGAAGACCGCCAAAATATGATTGATTCAGCATTACAAAAATATTTTCAAGTGGATAGATATTTGGCAAAAGGAGATATCTTTGGCGTCAGAATAAATTGGAACTGCAATTCCATTCTATGTATTCCTTGCAACCAAAAAGCACAAAAGAAACTTGGAAATCTTATCTATTTCAAGGTCATTGCTATGGAACCATCAGATGAACCAATTCTTCTTGTCAATCGAGTTTCAACTGCTTTGGTTCTTGTAGGGAGCATCCCTTCTGCTCTTCCACCAGATTTGTTAATTGCTGGACCAGAAGAACCTGTGCCTTTACAATGGGACATAGTAAAAGTTTTGGCTTCAGTGCTTACACCGGCTTTCTGTCCATCAGCACTTTCTTTAAAATTCAGAGTTTCAGTTCTATTGTATGGCTTAGCAGGTTGTGGGAAGCGGACTGTTGTTAGATATGTTGCTCGTCGGTTGGGCATGCATGTGGTGGAATATAATTGTCATGATTTAACATTGTCAGAGAAGAACACATCTGTAGCACTAGTTCATGCTTTCAAGACAGCTCGAAGATACTCACCAACTATACTTATTCTCCGTCATTTTGAAGTTTTCCGAGACACGCAAGCTCTTGAGGGTCCAGGAAATGATCAAAGAGGCAATACATCTGAAATTGCATCAATTATTAGGAAATTCACAGAGCCAGTGAATAAAGATGGTGGCATATACTCCCATGAGAAACAAAATGGTGAATTTGGTGAGAAGAGTGCTGACAATACAAGTGGGCATCCGATCTTGTTGATTGCAACTGCGGTTAGTTCAGAAGGTCTGCCTTCAACTATCAGACGATGCTTCAGCCATGAAATAAAAATGGGGCCTTTGACTGAAGAGCAAAGGGCTGAAATGCTATCCCAGTCACTGCAAAGTGTCATCTCCAATACTGATGCTGAGAGTTTTGCGAAAGAAATGGTTGGGCAGACATCTGGTTTCACACCCAGAGATATGCGTGCTTTGATTGCAGATGTTGGTGCAAACTTATTTTCTAAGAGTTTTGATGCTGCAGACAAAGCTAGGCCTAAAGATATTGATGGTTCTTGTAGTTCTGAAGCGATGCAGGACAACAACCACTTGAAAGTTCCACAAGAGGTTCAAGAAGTCAAAGAACACTTGACAAAGGCTTTGGAACGATCAAAGAAAAGAAATGCCGCTACATTGGGTGCTCCAAAGGTTCCAAATGTGAAATGGGAAGATGTTGGTGGGCTTGAGGATGTGAAAAAATCAATACTAGATACTGTTCAGTTGCCTCTCCTGCATAAGGATCTGTTTTCATCTGGATTACGTAAGCGGTCTGGTGTTCTTCTGTATGGTCCCCCAGGAACTGGCAAAACATTACTAGCCAAAGCTGTTGCCACCGAATGTTCCTTGAATTTTCTTAGTGTGAAAGGGCCTGAACTAATCAACATGTACATTGGAGAGTCTGAGAAGAATGTGCGAGACATTTTCCAGAAGGCCAGATCATCACGACCATGTGTTATCTTCTTTGATGAGCTTGATTCTCTTGCTCCGGCCCGGGGTGCTTCTGGGGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTGGCTGAGATTGATGGCCTGAATGATTCTGCACAGGATCTCTTTATCATAGGTGCAAGTAACAGGCCAGACTTGATTGACCCTGCACTTTTACGCCCGGGCAGATTTGATAAACTGCTATATGTTGGAGTTAACTCTGATGCATCTTACAGAGAGAGGGTCCTTAAAGCACTTACCAGAAAGTTTAAATTGTCTGAAGACGTGTCACTTTACTCAATAGCTAAAAAGTGTCCGCCAAACTTTACTGGTGCAGACATGTATGCCTTGTGTGCAGATGCATGGTTTCAGGCTGCAAAACGCAAGGTTTTAAGTGCAGATCCTGAGTCTTCCGGTAAGGATGATGACGCAGACTCTGTTATTGTTGAGTACAGTGATTTTGTCCAGGTCTTGGTAGAGCTGACGCCTTCTCTGTCGAAGGCTGAGCTTAAAAGGTACGAGCAACTGAGAGATCAGTTTGAAGGCAGATCAAAATAA 2808 0.4355 MAGRRKPLVLASTKQLINSVLSSSQGGEATPGAGDKLFDDGSPRNLQLPVGILRISEDANERPKPQLAALYDSALVGLSTSFLRRLSITSGSLVLVKNVEMNIQGVAQAVALDPPGSDECASDVKLPSPPIMLVFPSCAFPNGGVLGHEVAYISPLLAFNLGLHITCLESILHQGEEVLASYFDPKVNDKATAKRYETSVVDIELEPLVQAPRYASHLRVSFVKIPECGTLETLRGISPMESEDRQNMIDSALQKYFQVDRYLAKGDIFGVRINWNCNSILCIPCNQKAQKKLGNLIYFKVIAMEPSDEPILLVNRVSTALVLVGSIPSALPPDLLIAGPEEPVPLQWDIVKVLASVLTPAFCPSALSLKFRVSVLLYGLAGCGKRTVVRYVARRLGMHVVEYNCHDLTLSEKNTSVALVHAFKTARRYSPTILILRHFEVFRDTQALEGPGNDQRGNTSEIASIIRKFTEPVNKDGGIYSHEKQNGEFGEKSADNTSGHPILLIATAVSSEGLPSTIRRCFSHEIKMGPLTEEQRAEMLSQSLQSVISNTDAESFAKEMVGQTSGFTPRDMRALIADVGANLFSKSFDAADKARPKDIDGSCSSEAMQDNNHLKVPQEVQEVKEHLTKALERSKKRNAATLGAPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFSSGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSSRPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSAQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLSEDVSLYSIAKKCPPNFTGADMYALCADAWFQAAKRKVLSADPESSGKDDDADSVIVEYSDFVQVLVELTPSLSKAELKRYEQLRDQFEGRSK 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01789 935 CDD RecA-like_PEX6_r2 661 820 IPR047533 -
Accr2g01789 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 342 586 IPR027417 -
Accr2g01789 935 FunFam Peroxisomal biogenesis factor 6 647 836 - -
Accr2g01789 935 Gene3D - 647 924 IPR027417 -
Accr2g01789 935 MobiDBLite consensus disorder prediction 476 495 - -
Accr2g01789 935 Pfam ATPase family associated with various cellular activities (AAA) 689 821 IPR003959 GO:0005524|GO:0016887
Accr2g01789 935 Pfam ATPase family associated with various cellular activities (AAA) 375 528 IPR003959 GO:0005524|GO:0016887
Accr2g01789 935 Gene3D - 349 552 IPR027417 -
Accr2g01789 935 SMART AAA_5 371 532 IPR003593 GO:0016887
Accr2g01789 935 SMART AAA_5 685 825 IPR003593 GO:0016887
Accr2g01789 935 FunFam Peroxisome biogenesis protein 6 823 909 - -
Accr2g01789 935 FunFam Peroxisome biogenesis protein 6 344 529 - -
Accr2g01789 935 Gene3D - 823 909 - -
Accr2g01789 935 PANTHER AAA-FAMILY ATPASE 71 932 - -
Accr2g01789 935 ProSitePatterns AAA-protein family signature. 792 810 IPR003960 GO:0005524|GO:0016887
Accr2g01789 935 MobiDBLite consensus disorder prediction 22 42 - -
Accr2g01789 935 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 648 929 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01789 Accr-Chr2 51857158 51864756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01789 655 880 Calmodulin-binding Proteins AT3G56690 38.767 3.28e-39 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01789 K13339 - qsa:O6P43_010733 1290.79