Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01787 ATGTCAAACAGCGTTTCAGGCGAGGAAGGAAGCTTCTCGTCCCGGAACACAGGAGAAGGAGAAGTTCATGAAGAAGTGAAGGATAATCAACATGATCAGCTAGAGCAACACAACCACTTGGTGATGGGCCCTACAGATTCAGGTCCCAATAACAATTCTGCAAATCAACTACCAACCAAGAAGAAGAGAAACCTTCCGGGAACTCCAGATCCGAACGCTGAGATTGTCGCGTTGTCGCCGACGACGCTGATGACGAGGAATAGATTCGTGTGCGAGATATGCAACAAGGGGTTTCAGAGGGACCAGAATCTGCAGCTGCACAGGAGAGGACACAATCTGCCGTGGAAGCTGAGGCAGAGGGCGAGCACGGAGGTGAAGAAGAGGGTGTACGTGTGCCCTGAGCCCACCTGCGTGCACCATAACCCAGCTCGAGCACTGGGAGACCTCACAGGCATCAAGAAGCATTACAGCAGAAAGCACGGCGAGAAGAAGTGGAAGTGCGATAAGTGCTCCAAACGATACGCCGTCCAATCTGACTGGAAGGCCCACCACAAAACCTGTGGCACCCGCGAATACAAATGCGATTGTGGCACCATTTTCTCCAGGAGAGATAGCTTCATCACGCACAGGGCTTTTTGTGACGCGTTAGCTGAAGAAAACAACCGAGTGAACCAAGGATTGCAAAATCATCAGGTGGCAGATCTTATGCTCACTATGCCTCTCACCACCTCCTCCGACTTCAACTACCCACTCAGGCCCATCTCCCAGGACCTCAGCCCAAGCCCATTCAATCCCATCAGCATGGGTGGGCCCATGTTCTCCACAACATCCCCTTCCCTCTTCGCCGGCCCAAAGCCCATCTCCACCACCTCCTCCTCCGCCCTCCAGCTCAGCTCCAACACTTCCTCTCCCACTTTCAGTTACTTCCCTGCGGACAGCAAAAACATGGGCCCAAACCCAATGTTTTCTGGGTCGACCCAAATGTCCGCAACGGCTTTGTTACAGAAAGCGGCCCAAATGGGTGCCAGCGCAAGCACCAACAGCATCGACTCTCCCATGATGCAAAGGAACTTGGTCACTAGTACTATGGCTGGTCCTGATCATAATAATGTCTCTTCCATTCATAAACCACCATTTTCTGCTGCTGATTCTTCCTCCTATGATCAACCCAACATGGCCGGGATTAGTGGTGCTGGACCACTCACCAATCGACTGTTTCAGAATAAAGCCCCACAAGAAATTTCAGAACTGTTTGATGCTACTAGTGCTGCTGCTGCTGCTGGATCTGCAATTACTGATATGGGTGAGTTCGGCCAGATTTTCCTGGCAAGTGATCAGAACCAGGGATTCATGATGAAGAACAATGTGGAACGAGAGAATAACAGAACTACTACTAGTTCTAGTTTGATGATGCATGAGAGAGATGTAAGAGAAGAGAATCCGATGGGGCCTAATAATAATATGGCAACGGTTCATGATTTCTTGGGTGTTGGTGGCGGTTCAGCGAATTTTCATGAGCCAGATCAGCAGCAAAGGTTGGAGTTTGAAGCCATGAATCATCAGAGAGTATCATCAGTTATGAATCACTTTCATCAACACCATAATCTTCCTCGTGGGAATTCACATTTGGATAAAACCATTTGGGATGTTTGA 1653 0.4955 MSNSVSGEEGSFSSRNTGEGEVHEEVKDNQHDQLEQHNHLVMGPTDSGPNNNSANQLPTKKKRNLPGTPDPNAEIVALSPTTLMTRNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQRASTEVKKRVYVCPEPTCVHHNPARALGDLTGIKKHYSRKHGEKKWKCDKCSKRYAVQSDWKAHHKTCGTREYKCDCGTIFSRRDSFITHRAFCDALAEENNRVNQGLQNHQVADLMLTMPLTTSSDFNYPLRPISQDLSPSPFNPISMGGPMFSTTSPSLFAGPKPISTTSSSALQLSSNTSSPTFSYFPADSKNMGPNPMFSGSTQMSATALLQKAAQMGASASTNSIDSPMMQRNLVTSTMAGPDHNNVSSIHKPPFSAADSSSYDQPNMAGISGAGPLTNRLFQNKAPQEISELFDATSAAAAAGSAITDMGEFGQIFLASDQNQGFMMKNNVERENNRTTTSSSLMMHERDVREENPMGPNNNMATVHDFLGVGGGSANFHEPDQQQRLEFEAMNHQRVSSVMNHFHQHHNLPRGNSHLDKTIWDV 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01787 550 Gene3D Classic Zinc Finger 143 223 - -
Accr2g01787 550 Gene3D Classic Zinc Finger 67 134 - -
Accr2g01787 550 MobiDBLite consensus disorder prediction 18 35 - -
Accr2g01787 550 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 38 516 IPR031140 -
Accr2g01787 550 SMART c2h2final6 165 185 IPR013087 -
Accr2g01787 550 SMART c2h2final6 89 111 IPR013087 -
Accr2g01787 550 SMART c2h2final6 130 160 IPR013087 -
Accr2g01787 550 MobiDBLite consensus disorder prediction 1 17 - -
Accr2g01787 550 FunFam protein indeterminate-domain 12-like 68 136 - -
Accr2g01787 550 FunFam protein indeterminate-domain 5, chloroplastic-like 143 222 - -
Accr2g01787 550 SUPERFAMILY beta-beta-alpha zinc fingers 88 185 IPR036236 -
Accr2g01787 550 MobiDBLite consensus disorder prediction 43 62 - -
Accr2g01787 550 ProSiteProfiles Zinc finger C2H2 type domain profile. 89 111 IPR013087 -
Accr2g01787 550 ProSitePatterns Zinc finger C2H2 type domain signature. 91 111 IPR013087 -
Accr2g01787 550 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01787 Accr-Chr2 51831847 51834251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01787 55 367 IDZ Gene Family AT3G50700 51.884 1.31e-112 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr2g01787 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01787 - - pcin:129290068 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01787 2 51831847 51834251 Accr2g01787 2 51831847 51834251 ECH