Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01775 ATGGATGGGGTTCAGGAAAGAAGTGTGGCTCCATCCTCAGCAGTCACTGCAAAGAAGAAGAAGAATGGTTCCATTCGATCCATTTTCATGCACGCCGATACAGCTGATTTGTTCCTCATGGTGCTCGGCGTCTTTGGGTCCCTCGGCGACGGTTTCACCACACCTCTCGTCCTCTTTATCAGTAGCCGCTTGATGAACAGTGTTGGCTCTAGTTCTACCCTCGGTCCAACTTCTTTTACCCATAACATCGACAAGAATGCAGTGAACATGCTGTATTTGGCTGCTGGTTCCTTCTTCGCTTGCTTCCTCGAGGGATATTGCTGGACCAGAACAGGGGAAAGACAAGCTGCCAGAATGAGAGCCAGGTATTTGAAGGCGGTGCTCAGACAAGATGTTGCTTACTTTGATCTTCACGTCACAAGCACGTCGGAGGTCATCACCAGCGTCTCTAACGACAGCCTTGTAATCCAAGATGCTATTTCTGAAAAGGTGCCGAACTTCTTGATGAATGTGTTTATGTTCTTCGGAAGCTACATAGCGGCTTTTGCAATGTTATGGAGGCTGGCTATTGTGGGGTTCCCGTTCGTGGTTCTGCTGGTGATCCCTGGTTTACTTTACGGTAGGACTCTGATGGGGTTGGCGAGGAAGATCAGAGAGGAGTATAATCAGGCCGGTACAATAGCAGAGCAGGCAATATCTTCCCTAAGAACTGTGTATGCCTTCGTCGGAGAAAGCAAGACCATCGTCGCCTACTCCGATGCTTTACAAGGATCTGTTAAACTGGGGCTCAAGCAGGGCTTAGCTAAGGGCTTAGCCATCGGAAGCAACGGCGTCGTCTTCGCCATCTGGTCATTTACGTCCTATTACGGCAGCCACCTCGTCATGTACCACGGAGCTAAAGGCGGTACTGTTTTTGCCGTCGGAGCCGCCGTGGCCGTTGGTGGCCTAGCTTTAGGTTCGGCTTTATCGAGCATGAAGTACTTCTCGGAAGCGAGTGCAGCAGGGGAGCGAATAATGGAAGTGATAAAAAGAGTTCCGAAGATTGATTCGGGCAACATGAGTGGAGAGATTCTGGAGAGTGTTTCAGGGGAAGTGGAATTCGAACACGTACAGTTCGCGTACCCGTCGAGGGCAACAAGCATAATTCTAAACGAATTCAACTTGAAGATTCCGGCGGGGAAGACAGTGGCCTTAGTGGGAGGGAGTGGATCAGGGAAATCAACAGTGATATCACTTTTGCAGAGATTTTATGATCCACTTGTGGGGGAGATAAGGCTTGATGGAGTGGCCATTCACAAGATGCAGCTCAAGTGGCTGAGGTCACAGATGGGTCTGGTCAGCCAAGAGCCTGCTCTGTTCGCCACCAGCATCACAGAGAACATTCTCTTTGGAAAGGAAGATGCTTCCATGGAAGAGGTCATTCAAGCTGCCCAAGCTTCTAATGCTCATAACTTCATTTCACTCCTGCCTCAGGGCTACGATACTCAGGTTGGCGAAAGAGGAGTTCAAATGTCAGGAGGGCAAAAACAGAGGATCGCCATTGCGCGAGCAATAATAAAGAAACCAAGACTGCTTCTGCTAGATGAAGCAACCAGTGCGCTAGATTCTGAATCAGAGCGAGTTGTTCAAGAAGCTCTGGACAAAGCAGCCGTGGGTCGTACCACAATCATCATCGCCCACCGTTTATCCACCATCCGAAACGCCGACGTCATCGCCGTCGTCCAGAACGGAAAGATCATGGAGATGGGTTCGCACGACGAGCTCATCCAAAACGACGATGGCCTCTACACATCTCTGATTCGTCTTCAACAGACAGAAAAACTCAAAACCCAACAGGAAGATACTGTCTCTGCGCCGTCTTCTATATCAAATAGAGACATGAACAACACTAGTAGCCGCAGGCTTTCCCTGGTGAGTCGTTCTAGCTCTGCTAACTCAATGGCACGGAATCCAACTTCAGTTGCTGATGAAGACGATGGTCAGCATGTCACAGAAGATAAGAAATTCCCTGTTCCTTCGTTTAGGAGATTGTTGGCTCTTAATCTCCCAGAATGGAAGCAGGCAATTATGGGGTGTGTAAGTGCGATTCTCTTTGGTGCGGTTCAGCCATTGTATGCATTCGCATTGGGGTCTATGATATCTGTGTATTTCTTGACAGACCACGATGAGATCAAAAGGAAGACGAGAATGTATTGCCTCTGCTTTTTGGGGGTTAGAGAGAGAATGCTATCAAAGATTCTCACATTTGAAGTTGGATGGTTCGATCAGGACGAGAATTCCAGTGGTGCTATTTGCTCTCGACTTGCCAAAGATGCCAATGTGGTGAGGTCTTTGGTGGGTGATAGAACGGCTTTACTGGTACAAACTTGTTCAGCAGTGACAATAGCCTGCACAATGGGGTTGGTCATTGCATGGAGGCTAGCACTTGTTATGGTAGCCATTCAGCCTCTTATTATCGCTTGCTTCTACACAAGGCGTGTCCTTCTAAAGAGTATGTCTAGCAAAGCCATTAAAGCCCAAGAGGAAAGTAGCAAGTTAGCTGCTGAAGCGGTTTCAAATCTTCGAACTGTCACTGCCTTCTCTTCACAAGATCGCATATTGAAGATGCTCCAGAAGGCTCAAGAAGGGCCAAGCAAAGAGAGTATTCGTCAATCCTGGTACGCAGGTATAGGCCTGGGATGTTCACAGGGCCTTATGTCTTGTACCTGGGCTTTAGACTTTTGGTATGGTGGCAGGCTTATCTCCCATGGTTATATAAACGCAAAAGCATTGTTCGAGACCTTCATGATTTTGGTGAGTACAGGACGAGTTATTGCCGATGCCGGAAGTATGACCTCGGACCTGGCCAAGGGTGCTGATTCAGTGGGCTCTGTTTTTGCAGTGTTAGACAAATACACTAAAATTGAGCCCCAAGACCCAGATGGGTACCAGCCTGAGAAGATAACCGGCCACATCGAACTCCGGGATGTACATTTTGCGTACCCAGCCAGGCCCGACGTGATGATCTTCCAAGGATTTTCACTCAAAATCGATGCTGGGAAATCAACAGCACTGGTTGGCCAAAGTGGGTCTGGCAAATCAACCATCATAGGGTTAATAGAGAGATTCTACGACCCACTGAAAGGAGCAGTGACCATCGACGGCAAGGACATAAGGTCGTATCAACTCAGAGCACTGAGGAAACACATAGCGTTGGTGAGTCAAGAGCCGACGTTGTTCAGTGGAAGCATAAGAGAGAACATTGCATACGGAGCGTCGGATAAGGTAGGCGAAGCGGAGATCATAGAAGCAGCGAGAGCAGCGAACGCTCATGATTTCATAGGAAGTCTAAAGGATGGATACGACACGTCGTGTGGGGACAGGGGTGTACAGCTGTCGGGAGGGCAGAAGCAGAGGATCGCGATCGCCAGGGCGATATTGAAGAATCCGACGGTGTTGCTGTTGGACGAGGCAACGAGCGCGCTGGACAGCCAATCGGAGAAGGTGGTGCAAGAAGCATTGGATAGGGTTATGGTGGGGAGGACGAGCGTGGTGGTGGCCCACAGGTTGAGCACCATACAGAACTGTGATCTGATTGCTGTTTTGGATAAAGGCAAAGTGGTGGAGAAAGGGACCCATTCGTCTTTGTTGGCTAAAGGACCCACCGGAGCCTATCACTCTCTGGTCACTCTTCAGAGATCGCCGCCACCAAACGCCGCTCCCAGCACTGGCCGGCGTTGA 3720 0.4938 MDGVQERSVAPSSAVTAKKKKNGSIRSIFMHADTADLFLMVLGVFGSLGDGFTTPLVLFISSRLMNSVGSSSTLGPTSFTHNIDKNAVNMLYLAAGSFFACFLEGYCWTRTGERQAARMRARYLKAVLRQDVAYFDLHVTSTSEVITSVSNDSLVIQDAISEKVPNFLMNVFMFFGSYIAAFAMLWRLAIVGFPFVVLLVIPGLLYGRTLMGLARKIREEYNQAGTIAEQAISSLRTVYAFVGESKTIVAYSDALQGSVKLGLKQGLAKGLAIGSNGVVFAIWSFTSYYGSHLVMYHGAKGGTVFAVGAAVAVGGLALGSALSSMKYFSEASAAGERIMEVIKRVPKIDSGNMSGEILESVSGEVEFEHVQFAYPSRATSIILNEFNLKIPAGKTVALVGGSGSGKSTVISLLQRFYDPLVGEIRLDGVAIHKMQLKWLRSQMGLVSQEPALFATSITENILFGKEDASMEEVIQAAQASNAHNFISLLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKKPRLLLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIRNADVIAVVQNGKIMEMGSHDELIQNDDGLYTSLIRLQQTEKLKTQQEDTVSAPSSISNRDMNNTSSRRLSLVSRSSSANSMARNPTSVADEDDGQHVTEDKKFPVPSFRRLLALNLPEWKQAIMGCVSAILFGAVQPLYAFALGSMISVYFLTDHDEIKRKTRMYCLCFLGVRERMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRTALLVQTCSAVTIACTMGLVIAWRLALVMVAIQPLIIACFYTRRVLLKSMSSKAIKAQEESSKLAAEAVSNLRTVTAFSSQDRILKMLQKAQEGPSKESIRQSWYAGIGLGCSQGLMSCTWALDFWYGGRLISHGYINAKALFETFMILVSTGRVIADAGSMTSDLAKGADSVGSVFAVLDKYTKIEPQDPDGYQPEKITGHIELRDVHFAYPARPDVMIFQGFSLKIDAGKSTALVGQSGSGKSTIIGLIERFYDPLKGAVTIDGKDIRSYQLRALRKHIALVSQEPTLFSGSIRENIAYGASDKVGEAEIIEAARAANAHDFIGSLKDGYDTSCGDRGVQLSGGQKQRIAIARAILKNPTVLLLDEATSALDSQSEKVVQEALDRVMVGRTSVVVAHRLSTIQNCDLIAVLDKGKVVEKGTHSSLLAKGPTGAYHSLVTLQRSPPPNAAPSTGRR 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01775 1239 CDD ABC_6TM_Pgp_ABCB1_D2_like 678 968 - -
Accr2g01775 1239 SMART AAA_5 392 578 IPR003593 GO:0016887
Accr2g01775 1239 SMART AAA_5 1012 1205 IPR003593 GO:0016887
Accr2g01775 1239 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 338 - -
Accr2g01775 1239 FunFam ABC transporter B family member 4 355 612 - -
Accr2g01775 1239 SUPERFAMILY ABC transporter transmembrane region 668 970 IPR036640 GO:0005524|GO:0016020
Accr2g01775 1239 MobiDBLite consensus disorder prediction 610 665 - -
Accr2g01775 1239 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 365 601 IPR003439 GO:0005524
Accr2g01775 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 974 1225 IPR027417 -
Accr2g01775 1239 ProSitePatterns ABC transporters family signature. 504 518 IPR017871 GO:0005524|GO:0016887
Accr2g01775 1239 FunFam ABC transporter B family member 1 27 363 - -
Accr2g01775 1239 ProSitePatterns ABC transporters family signature. 1125 1139 IPR017871 GO:0005524|GO:0016887
Accr2g01775 1239 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 738 950 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g01775 1239 CDD ABC_MTABC3_MDL1_MDL2 985 1225 - -
Accr2g01775 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 603 IPR027417 -
Accr2g01775 1239 MobiDBLite consensus disorder prediction 610 652 - -
Accr2g01775 1239 CDD ABC_MTABC3_MDL1_MDL2 365 603 - -
Accr2g01775 1239 SUPERFAMILY ABC transporter transmembrane region 36 346 IPR036640 GO:0005524|GO:0016020
Accr2g01775 1239 Gene3D - 975 1229 IPR027417 -
Accr2g01775 1239 FunFam ABC transporter B family member 4 975 1231 - -
Accr2g01775 1239 PANTHER ABC TRANSPORTER B FAMILY 13 738 IPR039421 -
Accr2g01775 1239 Gene3D ABC transporter type 1, transmembrane domain 663 964 IPR036640 GO:0005524|GO:0016020
Accr2g01775 1239 Gene3D - 355 604 IPR027417 -
Accr2g01775 1239 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 985 1222 IPR003439 GO:0005524
Accr2g01775 1239 Pfam ABC transporter 383 532 IPR003439 GO:0005524
Accr2g01775 1239 Pfam ABC transporter transmembrane region 739 932 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g01775 1239 Pfam ABC transporter transmembrane region 41 307 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g01775 1239 Gene3D ABC transporter type 1, transmembrane domain 28 611 IPR036640 GO:0005524|GO:0016020
Accr2g01775 1239 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 330 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g01775 1239 Pfam ABC transporter 1004 1153 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01775 Accr-Chr2 51581287 51588072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01775 714 1227 Calmodulin-binding Proteins AT2G36910 40.421 1.69e-115 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01775 K05658 - cave:132181353 1872.83