Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01774 ATGGATGGGGTTCAGGAAAGAAGTGTGGCTCCATCCTCAGCAGTCACTGCAAAGAAGAAGAAGAATGGTTCCATTCGATCCATTTTCATGCACGCCGATACAGCTGATTTGTTCCTCATGGTGCTCGGCGTCTTTGGGTCCCTCGGCGACGGTTTCACCACACCTCTCGTCCTCTTTATCAGTAGCCGCTTGATGAACAGTGTTGGCTCTAGTTCTACCCTCGGTCCAACTTCTTTTACCCATAACATCGACAAGAATGCAGTGAACATGCTGTATTTGGCTGCTGGTTCCTTCTTCGCTTGCTTCCTCGAGGGATATTGCTGGACCAGAACAGGGGAAAGACAAGCTGCCAGAATGAGAGCCAGGTATTTGAAGGCGGTGCTCAGACAAGATGTTGCTTACTTTGATCTTCACGTCACAAGCACGTCGGAGGTCATCACCAGCGTCTCTAACGACAGCCTTGTAATCCAAGATGCTATTTCTGAAAAGGTGCCGAACTTCTTGATGAATGTGTTTATGTTCTTCGGAAGCTACATAGCGGCTTTTGCAATGTTATGGAGGCTGGCTATTGTGGGGTTCCCGTTCGTGGTTCTGCTGGTGATCCCTGGTTTACTTTACGGTAGGACTCTGATGGGGTTGGCGAGGAAGATCAGAGAGGAGTATAATCAGGCCGGTACAATAGCAGAGCAGGCAATATCTTCCCTAAGAACTGTGTATGCCTTCGTCGGAGAAAGCAAGACCATCGTCGCCTACTCCGATGCTTTACAAGGATCTGTTAAACTGGGGCTCAAGCAGGGCTTAGCTAAGGGCTTAGCCATCGGAAGCAACGGCGTCGTCTTCGCCATCTGGTCATTTACGTCCTATTACGGCAGCCACCTCGTCATGTACCACGGAGCTAAAGGCGGTACTGTTTTTGCCGTCGGAGCCGCCGTGGCCGTTGGTGGCCTAGCTTTAGGTTCGGCTTTATCGAGCATGAAGTACTTCTCGGAAGCGAGTGCAGCAGGGGAGCGAATAATGGAAGTGATAAAAAGAGTTCCGAAGATTGATTCGGGCAACATGAGTGGAGAGATTCTGGAGAGTGTTTCAGGGGAAGTGGAATTCGAACACGTACAGTTCGCGTACCCGTCGAGGGCAACAAGCATAATTCTAAACGAATTCAACTTGAAGATTCCGGCGGGGAAGACAGTGGCCTTAGTGGGAGGGAGTGGATCAGGGAAATCAACAGTGATATCACTTTTGCAGAGATTTTATGATCCACTTGTGGGGGAGATAAGGCTTGATGGAGTGGCCATTCACAAGATGCAGCTCAAGTGGCTGAGGTCACAGATGGGTCTGGTCAGCCAAGAGCCTGCTCTGTTCGCCACCAGCATCACAGAGAACATTCTCTTTGGAAAGGAAGATGCTTCCATGGAAGAGGTCATTCAAGCTGCCCAAGCTTCTAATGCTCATAACTTCATTTCACTCCTGCCTCAGGGCTACGATACTCAGGTTGGCGAAAGAGGAGTTCAAATGTCAGGAGGGCAAAAACAGAGGATCGCCATTGCGCGAGCAATAATAAAGAAACCAAGACTGCTTCTGCTAGATGAAGCAACCAGTGCGCTAGATTCTGAATCAGAGCGAGTTGTTCAAGAAGCTCTGGACAAAGCAGCCGTGGGTCGTACCACAATCATCATCGCCCACCGTTTATCCACCATCCGAAACGCCGACGTCATCGCCGTCGTCCAGAACGGAAAGATCATGGAGATGGGTTCGCACGACGAGCTCATCCAAAACGACGATGGCCTCTACACATCTCTGATTCGTCTTCAACAGACAGAAAAACTCAAAACCCAACAGGAAGATACTGTCTCTGCGCCGTCTTCTATATCAAATAGAGACATGAACAACACTAGTAGCCGCAGGCTTTCCCTGGTGAGTCGTTCTAGCTCTGCTAACTCAATGGCACGGAATCCAACTTCAGTTGCTGATGAAGACGATGGTCAGCATGTCACAGAAGATAAGAAATTCCCTGTTCCTTCGTTTAGGAGATTGTTGGCTCTTAATCTCCCAGAATGGAAGCAGGCAATTATGGGGTGTGTAAGTGCGATTCTCTTTGGTGCGGTTCAGCCATTGTATGCATTCGCATTGGGGTCTATGATATCTGTGTATTTCTTGACAGACCACGATGAGATCAAAAGGAAGACGAGAATGTATTGCCTCTGCTTTTTGGGGTTGGCTATCTTCTCTCTACTTATTAATATAAGCCAGCATTATTATTTTGCTTACATGGGTGAGTACCTTACCAAAAGGGTTAGAGAGAGAATGCTATCAAAGATTCTCACATTTGAAGTTGGATGGTTCGATCAGGACGAGAATTCCAGTGGTGCTATTTGCTCTCGACTTGCCAAAGATGCCAATGTGGTGAGGTCTTTGGTGGGTGATAGAACGGCTTTACTGGTACAAACTTGTTCAGCAGTGACAATAGCCTGCACAATGGGGTTGGTCATTGCATGGAGGCTAGCACTTGTTATGGTAGCCATTCAGCCTCTTATTATCGCTTGCTTCTACACAAGGCGTGTCCTTCTAAAGAGTATGTCTAGCAAAGCCATTAAAGCCCAAGAGGAAAGTAGCAAGTTAGCTGCTGAAGCGGTTTCAAATCTTCGAACTGTCACTGCCTTCTCTTCACAAGATCGCATATTGAAGATGCTCCAGAAGGCTCAAGAAGGGCCAAGCAAAGAGAGTATTCGTCAATCCTGGTACGCAGGTATAGGCCTGGGATGTTCACAGGGCCTTATGTCTTGTACCTGGGCTTTAGACTTTTGGTATGGTGGCAGGCTTATCTCCCATGGTTATATAAACGCAAAAGCATTGTTCGAGACCTTCATGATTTTGGTGAGTACAGGACGAGTTATTGCCGATGCCGGAAGTATGACCTCGGACCTGGCCAAGGGTGCTGATTCAGTGGGCTCTGTTTTTGCAGTGTTAGACAAATACACTAAAATTGAGCCCCAAGACCCAGATGGGTACCAGCCTGAGAAGATAACCGGCCACATCGAACTCCGGGATGTACATTTTGCGTACCCAGCCAGGCCCGACGTGATGATCTTCCAAGGATTTTCACTCAAAATCGATGCTGGGAAATCAACAGCACTGGTTGGCCAAAGTGGGTCTGGCAAATCAACCATCATAGGGTTAATAGAGAGATTCTACGACCCACTGAAAGGAGCAGTGACCATCGACGGCAAGGACATAAGGTCGTATCAACTCAGAGCACTGAGGAAACACATAGCGTTGGTGAGTCAAGAGCCGACGTTGTTCAGTGGAAGCATAAGAGAGAACATTGCATACGGAGCGTCGGATAAGGTAGGCGAAGCGGAGATCATAGAAGCAGCGAGAGCAGCGAACGCTCATGATTTCATAGGAAGTCTAAAGGATGGATACGACACGTCGTGTGGGGACAGGGGTGTACAGCTGTCGGGAGGGCAGAAGCAGAGGATCGCGATCGCCAGGGCGATATTGAAGAATCCGACGGTGTTGCTGTTGGACGAGGCAACGAGCGCGCTGGACAGCCAATCGGAGAAGGTGGTGCAAGAAGCATTGGATAGGGTTATGGTGGGGAGGACGAGCGTGGTGGTGGCCCACAGGTTGAGCACCATACAGAACTGTGATCTGATTGCTGTTTTGGATAAAGGCAAAGTGGTGGAGAAAGGGACCCATTCGTCTTTGTTGGCTAAAGGACCCACCGGAGCCTATCACTCTCTGGTCACTCTTCAGAGATCGCCGCCACCAAACGCCGCTCCCAGCACTGGCCGGCGTTGA 3798 0.4908 MDGVQERSVAPSSAVTAKKKKNGSIRSIFMHADTADLFLMVLGVFGSLGDGFTTPLVLFISSRLMNSVGSSSTLGPTSFTHNIDKNAVNMLYLAAGSFFACFLEGYCWTRTGERQAARMRARYLKAVLRQDVAYFDLHVTSTSEVITSVSNDSLVIQDAISEKVPNFLMNVFMFFGSYIAAFAMLWRLAIVGFPFVVLLVIPGLLYGRTLMGLARKIREEYNQAGTIAEQAISSLRTVYAFVGESKTIVAYSDALQGSVKLGLKQGLAKGLAIGSNGVVFAIWSFTSYYGSHLVMYHGAKGGTVFAVGAAVAVGGLALGSALSSMKYFSEASAAGERIMEVIKRVPKIDSGNMSGEILESVSGEVEFEHVQFAYPSRATSIILNEFNLKIPAGKTVALVGGSGSGKSTVISLLQRFYDPLVGEIRLDGVAIHKMQLKWLRSQMGLVSQEPALFATSITENILFGKEDASMEEVIQAAQASNAHNFISLLPQGYDTQVGERGVQMSGGQKQRIAIARAIIKKPRLLLLDEATSALDSESERVVQEALDKAAVGRTTIIIAHRLSTIRNADVIAVVQNGKIMEMGSHDELIQNDDGLYTSLIRLQQTEKLKTQQEDTVSAPSSISNRDMNNTSSRRLSLVSRSSSANSMARNPTSVADEDDGQHVTEDKKFPVPSFRRLLALNLPEWKQAIMGCVSAILFGAVQPLYAFALGSMISVYFLTDHDEIKRKTRMYCLCFLGLAIFSLLINISQHYYFAYMGEYLTKRVRERMLSKILTFEVGWFDQDENSSGAICSRLAKDANVVRSLVGDRTALLVQTCSAVTIACTMGLVIAWRLALVMVAIQPLIIACFYTRRVLLKSMSSKAIKAQEESSKLAAEAVSNLRTVTAFSSQDRILKMLQKAQEGPSKESIRQSWYAGIGLGCSQGLMSCTWALDFWYGGRLISHGYINAKALFETFMILVSTGRVIADAGSMTSDLAKGADSVGSVFAVLDKYTKIEPQDPDGYQPEKITGHIELRDVHFAYPARPDVMIFQGFSLKIDAGKSTALVGQSGSGKSTIIGLIERFYDPLKGAVTIDGKDIRSYQLRALRKHIALVSQEPTLFSGSIRENIAYGASDKVGEAEIIEAARAANAHDFIGSLKDGYDTSCGDRGVQLSGGQKQRIAIARAILKNPTVLLLDEATSALDSQSEKVVQEALDRVMVGRTSVVVAHRLSTIQNCDLIAVLDKGKVVEKGTHSSLLAKGPTGAYHSLVTLQRSPPPNAAPSTGRR 1265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01774 1265 Gene3D - 1001 1255 IPR027417 -
Accr2g01774 1265 FunFam ABC transporter B family member 4 1001 1257 - -
Accr2g01774 1265 Pfam ABC transporter 1030 1179 IPR003439 GO:0005524
Accr2g01774 1265 CDD ABC_6TM_Pgp_ABCB1_D1_like 40 338 - -
Accr2g01774 1265 MobiDBLite consensus disorder prediction 610 665 - -
Accr2g01774 1265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 365 601 IPR003439 GO:0005524
Accr2g01774 1265 ProSitePatterns ABC transporters family signature. 504 518 IPR017871 GO:0005524|GO:0016887
Accr2g01774 1265 Gene3D ABC transporter type 1, transmembrane domain 90 979 IPR036640 GO:0005524|GO:0016020
Accr2g01774 1265 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1011 1248 IPR003439 GO:0005524
Accr2g01774 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 358 603 IPR027417 -
Accr2g01774 1265 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 689 976 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g01774 1265 SMART AAA_5 392 578 IPR003593 GO:0016887
Accr2g01774 1265 SMART AAA_5 1038 1231 IPR003593 GO:0016887
Accr2g01774 1265 MobiDBLite consensus disorder prediction 610 652 - -
Accr2g01774 1265 SUPERFAMILY ABC transporter transmembrane region 36 346 IPR036640 GO:0005524|GO:0016020
Accr2g01774 1265 CDD ABC_MTABC3_MDL1_MDL2 365 603 - -
Accr2g01774 1265 ProSitePatterns ABC transporters family signature. 1151 1165 IPR017871 GO:0005524|GO:0016887
Accr2g01774 1265 FunFam Putative ABC transporter B family member 8 654 999 - -
Accr2g01774 1265 FunFam ABC transporter B family member 1 27 363 - -
Accr2g01774 1265 PANTHER ABC TRANSPORTER B FAMILY 13 747 IPR039421 -
Accr2g01774 1265 Pfam ABC transporter 383 532 IPR003439 GO:0005524
Accr2g01774 1265 FunFam ABC transporter B family member 4 355 612 - -
Accr2g01774 1265 CDD ABC_6TM_Pgp_ABCB1_D2_like 678 994 - -
Accr2g01774 1265 SUPERFAMILY ABC transporter transmembrane region 668 996 IPR036640 GO:0005524|GO:0016020
Accr2g01774 1265 CDD ABC_MTABC3_MDL1_MDL2 1011 1251 - -
Accr2g01774 1265 Gene3D - 363 621 IPR027417 -
Accr2g01774 1265 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 330 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g01774 1265 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1000 1251 IPR027417 -
Accr2g01774 1265 Pfam ABC transporter transmembrane region 41 307 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr2g01774 1265 Pfam ABC transporter transmembrane region 689 958 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01774 Accr-Chr2 51581287 51588072 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01774 690 1253 Calmodulin-binding Proteins AT2G36910 38.908 1.49e-118 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01774 K05658 - cave:132181353 1932.53