Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01754 ATGGGATTTGGTAATAATGCAATTCAAGCTGGAAGTTTGGACGTGGGCAAGTCAAATGGAAGGAAGAAGAAAGATGGCGCAGAGAAGCATAGTGGTTGTTGGGCTAAATTCAATTGCATCAGAAGCTGCATACCTTCTAGATCAAAGATTGATAACTCCTTAAGTGGTGGTCCAAGCGCCCATAATGTGGAAAACAGATGTACAAATGAAAATACCAAAGATCGAACAGTTGCTCCTCCAGAGTCCTCCACTACCACTAGCAATGCAGGAAGTATACCCTCAACTCCAAAATTCAGTGAGGAGTTGAAGGTTTCTTCTCGTTTGAGAAAGTTCACATTCAATGAACTTAAATTGGCAACTCGGAATTTCAGACCAGAGAGTCTTCTTGGTGAAGGTGGGTTTGGTTGTGTCTTCAAGGGTTGGATTGAAGAGAATGGAACTGCACCTGTCAAACCAGGTACTGGGCTTACTGTTGCAGTGAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAGTGGCTTGCTGAGCTGAATTATCTTGGTGATCTTGTCCACACTAATCTGGTTAAATTGATTGGTTTCTGTATTGAAGATGACCAAAGATTATTGGTTTACGAATTTATGCCCCGTGGAAGTTTGGAGAACCATCTCTTTAGAAAAGGGCCCTTGCCTCTTCCTTGGTCTATCAGAATGAAAATTGCACTTGGAGCTGCAAAAGGTCTTGCCTTTCTTCATGAAGAAGCTCAGAGGCCTGTAATATATCGAGATTTCAAGACATCTAATATCCTATTAGATGCGGAATACAATGCCAAACTTTCTGATTTTGGACTTGCCAAAGATGGTCCTGAGGTTGGAAAGACCCATGTATCGACCAGAGTTATGGGAACATATGGTTACGCAGCTCCTGAGTATGTGATGACTGGACATTTGACAACAAAAAGTGATGTTTATAGTTTTGGGGTAGTGCTTCTTGAAATGCTTACCGGTCGAAGAGCAATTGATAAAAATAGACCAAATGGGGAACACAACCTGGTGGAATGGGCAAGACCTGCACTTGGAGACCGGAGGATGTTCTACCGAATAATCGATCCTCGTCTTGAAGGTCACTTCTCAGTCAAAGGTTCACAGAAAGCTGCCCAACTGGCTGCCCAATGCCTGTGCCGCGATCCAAAATCGAGACCCATGATGAGTGAAGTTGTTCGAGTTCTTAAGCCTTTGCCAAACCTTAAGGATATGGCTATTTCATCTCAATACTTCCAGTTCACGCGAGTAGATCGCACTATGTCCATGCCAAATCCCAAAAATGGTTCAAAAACACAGCTTACATCAGTATCAAGGAAAGGTCAACCTGTAAGGATCCTGTCGAGTCCAAACGGTCCACGTGGTTCTCCATATCATCATTATTCCAAGTCACCAAAGCCTAATGGATGA 1434 0.4331 MGFGNNAIQAGSLDVGKSNGRKKKDGAEKHSGCWAKFNCIRSCIPSRSKIDNSLSGGPSAHNVENRCTNENTKDRTVAPPESSTTTSNAGSIPSTPKFSEELKVSSRLRKFTFNELKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAELNYLGDLVHTNLVKLIGFCIEDDQRLLVYEFMPRGSLENHLFRKGPLPLPWSIRMKIALGAAKGLAFLHEEAQRPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEVGKTHVSTRVMGTYGYAAPEYVMTGHLTTKSDVYSFGVVLLEMLTGRRAIDKNRPNGEHNLVEWARPALGDRRMFYRIIDPRLEGHFSVKGSQKAAQLAAQCLCRDPKSRPMMSEVVRVLKPLPNLKDMAISSQYFQFTRVDRTMSMPNPKNGSKTQLTSVSRKGQPVRILSSPNGPRGSPYHHYSKSPKPNG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01754 477 Pfam Protein kinase domain 126 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01754 477 MobiDBLite consensus disorder prediction 1 28 - -
Accr2g01754 477 Gene3D Transferase(Phosphotransferase) domain 1 209 426 - -
Accr2g01754 477 Gene3D Phosphorylase Kinase; domain 1 97 208 - -
Accr2g01754 477 FunFam Serine/threonine-protein kinase BIK1 91 208 - -
Accr2g01754 477 MobiDBLite consensus disorder prediction 428 477 - -
Accr2g01754 477 PANTHER OS01G0588500 PROTEIN-RELATED 81 407 - -
Accr2g01754 477 MobiDBLite consensus disorder prediction 51 97 - -
Accr2g01754 477 ProSitePatterns Protein kinases ATP-binding region signature. 129 161 IPR017441 GO:0005524
Accr2g01754 477 SUPERFAMILY Protein kinase-like (PK-like) 97 404 IPR011009 -
Accr2g01754 477 CDD STKc_IRAK 129 407 - -
Accr2g01754 477 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Accr2g01754 477 ProSiteProfiles Protein kinase domain profile. 123 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01754 477 FunFam Probable serine/threonine-protein kinase PBL8 209 424 - -
Accr2g01754 477 MobiDBLite consensus disorder prediction 428 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01754 Accr-Chr2 50928316 50932333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01754 109 420 Glycoside Hydrolase AT3G07070 55.732 1.22e-114 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr2g01754 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01754 - - gmx:100305393 815.839