Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01718 ATGGGTGAGAGGAATGAGATGGAGAAGATGAACGATGATGCCGTGTTGCCAGGTTTTAGGTTTCACCCCACGGACGAGGAGCTTGTTGATTTTTACCTCAGAAGAATGATTCAGCAGAAATCTCTCCCTATTGAGCTCATCAAGCAAGTAGATATCTACAAATACGATCCTTGGGATCTTCCAATGCTGGCGAGCACTGGGGAGAAAGAATGGTATTTCTACTGTCCAAGGGATAGAAAATACAGGAACAGTCCACGACCAAACAGAGTGACAAGAGCTGGGTTTTGGAAAGCCACGGGAACAGACAGGCCTATATACTCATCATCAGAAGGCAAGTGCATCGGCTTGAAGAAATCTCTTGTGTTCTACCGAGGCAGAGCCGCCAAAGGCATCAAAACTGATTGGATGATGCATGAATTTCGCCTCCCTTCTCCGCCGCTGACAGATTCATCGCCGTCGTCCAAGAAGCCCTTTGGCAACAACAAAACCCACTCTACTCCACAAGATTCATGGGCGATTTGTAGGATATTCAAGAAAACAAACTCCATGTCCATGGCACAGAAAGCTCTATCTCATACTTGGATGGCTCATCAGTTTCCGGCGGAGAGCATATCGGTGTCTGATATGCTCGCTCACTGTCCAAGCCGTAATAACAATCACTTGAGTTCCGAAAACATGTCTTGCACCACAGAACTATACGAGCATGTGTCTAGTGGTAATATCTCTGGTTCAGATCATGTTGGCTTCAATAAGGCCTCCTGCCAGATGCCTGTCGTCTCCGACGGTAGCGTCGTAGTAGCAGACACCTTCATGTTCTCTACTTTCGAATCATCAGGCCCTTGTGCCTATATAGGCTTTGAAGGGCCAAATAATAATATGATTCATAATGGCGTCTCGGTGGTGAGTATACCTCATCATCATGAAGACGTACAAGCATTAAACATGGCTGCATCTACAGTAGCGGAAGCTATTGGGTTTCCTTTCAGTTTGCCTCCACCAGTTTCAAACGATGCTTGGAAGCCTAATCTCCTATGGGAATCATCACAACCTTGTCCTAGCGACATGTCTACAAATAATAGATGCAGCAATTGA 1092 0.4597 MGERNEMEKMNDDAVLPGFRFHPTDEELVDFYLRRMIQQKSLPIELIKQVDIYKYDPWDLPMLASTGEKEWYFYCPRDRKYRNSPRPNRVTRAGFWKATGTDRPIYSSSEGKCIGLKKSLVFYRGRAAKGIKTDWMMHEFRLPSPPLTDSSPSSKKPFGNNKTHSTPQDSWAICRIFKKTNSMSMAQKALSHTWMAHQFPAESISVSDMLAHCPSRNNNHLSSENMSCTTELYEHVSSGNISGSDHVGFNKASCQMPVVSDGSVVVADTFMFSTFESSGPCAYIGFEGPNNNMIHNGVSVVSIPHHHEDVQALNMAASTVAEAIGFPFSLPPPVSNDAWKPNLLWESSQPCPSDMSTNNRCSN 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01718 363 ProSiteProfiles NAC domain profile. 15 179 IPR003441 GO:0003677|GO:0006355
Accr2g01718 363 MobiDBLite consensus disorder prediction 146 167 - -
Accr2g01718 363 Gene3D NAC domain 24 184 IPR036093 GO:0003677|GO:0006355
Accr2g01718 363 FunFam NAC domain-containing protein 35 24 182 - -
Accr2g01718 363 SUPERFAMILY NAC domain 10 179 IPR036093 GO:0003677|GO:0006355
Accr2g01718 363 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Accr2g01718 363 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 12 222 - -
Accr2g01718 363 MobiDBLite consensus disorder prediction 144 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01718 Accr-Chr2 50389011 50390196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01718 3 218 NAC Transcription Factor Family AT5G39820 61.702 8.47e-99 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g01718 NAM 1.2e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01718 - - pcin:129296062 494.582