Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01715 ATGGACTTAACCTCCGCCGCAATCAACAACATCGCCGCCTCTAAATCTCCGGAACCTGACAGTGAAATTCCCACCCGGATCCAACCCGCCCCCGTCAAGCCCTTGTCCTTCTCCAACGGCGTCCTCAAGCGCCATCAGCCCCACAACAAACACCCCCTGCCGTTAACCTACAAAGAGTGCTTGAAGAACCATGCAGCCAGCTTGGGAGGCCACGCGCTCGACGGTTGCGGCGAGTTCATGCCTTCTCCGAACGCCAATTCCGCCGACCCAAGCTCTATCAAATGCGCCGCCTGTGGCTGCCACCGTAATTTCCATCGCCGTGAGCCCGACGAGCCTATGTCCACCGCGACCCACGTCATCGAGTATCAGCCCCACCATCGGCACCACCCTCCGCCGCCTCCGCCGTTCCAAGCTCCGAATCGGAGCCCCAATTCAGCTTCCCCGCCCCCGATCTCATCTTCCTTCTACCCCTCCGCGCCCCACATGCTCCTGGCGCTCTCTGCCGGTTTGTCGGCCCATCCCGAGAGCACGGCTGCTCCGGCGAATGCTCTGGGGATGCCGACTGTGAATTCTAGGAAGCGGTTCAGGACTAAGTTCACACAAGAACAGAAGGATAAAATGCACCAGTTCGCTGAGAGAGTTGGGTGGAAGATGCAGAAGAGAGACGATGATTTGGTGCAAGAGTTCTGTCACGAGGTTGGGGTTGATAGAGGCGTTTTGAAGGTTTGGATGCACAATAATAAGAACACCTTTGTGAAGAAAGATGCGGTGAATGGGAATAGAAACGTTCTTGAGCTAGACCCAAACAACAATAACGACAATGAAATCACCGGCAACAACAACAACAACAACGGCAGCGCCGAGGACCCGAATCATCACTACCAGAACGATAGTGGGGCGAACGCCGGTACTAACGGGTCGTCTTCATCTTCTTAA 936 0.5577 MDLTSAAINNIAASKSPEPDSEIPTRIQPAPVKPLSFSNGVLKRHQPHNKHPLPLTYKECLKNHAASLGGHALDGCGEFMPSPNANSADPSSIKCAACGCHRNFHRREPDEPMSTATHVIEYQPHHRHHPPPPPPFQAPNRSPNSASPPPISSSFYPSAPHMLLALSAGLSAHPESTAAPANALGMPTVNSRKRFRTKFTQEQKDKMHQFAERVGWKMQKRDDDLVQEFCHEVGVDRGVLKVWMHNNKNTFVKKDAVNGNRNVLELDPNNNNDNEITGNNNNNNGSAEDPNHHYQNDSGANAGTNGSSSSS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01715 311 SUPERFAMILY Homeodomain-like 186 251 IPR009057 -
Accr2g01715 311 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 51 250 - -
Accr2g01715 311 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 57 108 IPR006456 -
Accr2g01715 311 FunFam Zinc-finger homeodomain protein 2 181 253 - -
Accr2g01715 311 MobiDBLite consensus disorder prediction 265 311 - -
Accr2g01715 311 NCBIfam homeobox domain, ZF-HD class 192 249 IPR006455 -
Accr2g01715 311 MobiDBLite consensus disorder prediction 1 31 - -
Accr2g01715 311 MobiDBLite consensus disorder prediction 129 146 - -
Accr2g01715 311 MobiDBLite consensus disorder prediction 1 16 - -
Accr2g01715 311 Gene3D - 185 252 - -
Accr2g01715 311 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 56 108 IPR006456 -
Accr2g01715 311 MobiDBLite consensus disorder prediction 123 154 - -
Accr2g01715 311 Pfam ZF-HD protein dimerisation region 56 109 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01715 Accr-Chr2 50338400 50339335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01715 15 285 ZF-HD Transcription Factor Family AT3G28920 56.338 4.89e-83 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr2g01715 ZF-HD_dimer 1.9e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01715 - - qsa:O6P43_009085 350.132