Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01693 ATGATGCTCGGAGAACCCCATCGTGCAAATCCGACGGTTCACATACCGCCGTGGCCAGTCATCGATGATCCGATACAAGAGGTGTACTCTCCCTACTCGATGAGTGGCGTGTCTAATAACTCCGACGGCAATGCGAGCGGCGGTGATTACTCTCCCTACTACTTACAAGAAGCACTGACGGCACTCCAGCGTTATCTTCCGTCAGCCGAAGCCGATATCGACTCCGATTCCGAGGTTCTTGGTCGAGAGTTGGACGCTCCGGTGGATGCCTACTCCTGCGACCATTTCCGCATGTTCGAGTTCAAGGTGAGGAGGTGCGCGCGCGGCCGGTCACATGACTGGACTGAGTGTCCTTATGCTCATCCGGGCGAGAAGGCTCGCCGTAGGGACCCGAGGAAGTATCACTATTCGGGTACTGCATGCCCTGATTTCCGCAAAGGGAATTGCAAGAAGGGAGATGCATGCGAGTTTGCTCATGGTGTGTTTGAGTGTTGGCTTCATCCAGCCCGTTATCGTACACAGCCATGCAAGGATGGCACCGGCTGCCGCCGAAGGGTCTGTTTCTTCGCTCACACGCCGGAGCAACTCAGGGTCCTTCCTCAGCAGAGCCCGAGGAGTGCTAACTCGGTGGACTCCTATGATGGGTCTCCTCTCAGGCAAGCAATTGACTCTTCTTGCGCAAAAGCGCTTCCATTCATGTCGTCTCCAGGTTCTATTTCCCCTCCTGCAACTCCTCCAACTCCTCCGACAGAATCTCCGCCTATGTCCCCGATGACACAGTCTCTTAGCCGCTCTCTGGGTTCGAGCTCTATCAATGAGATGGTGGCTTCTCTGCGTAATTTACAGCTGGGGAAGGTAAAGTCTCTACCCCCTTCTAGAAATGTTCCAATGGGATCTCCCCGTTTTGGATCTCCTCGTGGATCGGTGCTCCGTCCTGATTTTTGTAGCCTCCCGTCAACTCCTACTGAGGCACCGACTCGTTCTGGTGCAAGTTATTTCGATCTCTGGGATCAGATTTGTGAGGAGGAGCCTGCCATGGAGAGGGTGGAATCTGGAAGGGATATAAGGGCGAAGATGTTTGAAAAACTTAGCAAAGAGAACTCTCTCAATCGATCGGGTCCCAGTACATCCGCCGGAGCTCCGGATGTTGGTTGGGTTTCAGAGCTGGTTAAGTAA 1176 0.5391 MMLGEPHRANPTVHIPPWPVIDDPIQEVYSPYSMSGVSNNSDGNASGGDYSPYYLQEALTALQRYLPSAEADIDSDSEVLGRELDAPVDAYSCDHFRMFEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGNCKKGDACEFAHGVFECWLHPARYRTQPCKDGTGCRRRVCFFAHTPEQLRVLPQQSPRSANSVDSYDGSPLRQAIDSSCAKALPFMSSPGSISPPATPPTPPTESPPMSPMTQSLSRSLGSSSINEMVASLRNLQLGKVKSLPPSRNVPMGSPRFGSPRGSVLRPDFCSLPSTPTEAPTRSGASYFDLWDQICEEEPAMERVESGRDIRAKMFEKLSKENSLNRSGPSTSAGAPDVGWVSELVK 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01693 391 Gene3D - 135 199 - -
Accr2g01693 391 PANTHER UNKEMPT FAMILY MEMBER 57 391 IPR045234 -
Accr2g01693 391 FunFam Zinc finger CCCH domain-containing protein 66 93 161 - -
Accr2g01693 391 MobiDBLite consensus disorder prediction 365 391 - -
Accr2g01693 391 MobiDBLite consensus disorder prediction 287 308 - -
Accr2g01693 391 ProSiteProfiles Zinc finger C3H1-type profile. 136 162 IPR000571 GO:0046872
Accr2g01693 391 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 140 160 IPR000571 GO:0046872
Accr2g01693 391 SMART c3hfinal6 170 193 IPR000571 GO:0046872
Accr2g01693 391 SMART c3hfinal6 135 161 IPR000571 GO:0046872
Accr2g01693 391 MobiDBLite consensus disorder prediction 238 255 - -
Accr2g01693 391 MobiDBLite consensus disorder prediction 234 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01693 Accr-Chr2 50038954 50040129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01693 85 296 C2H2 Transcription Factor Family AT5G12850 49.533 1.39e-58 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Accr2g01693 zf-CCCH 3.9e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01693 - - qsa:O6P43_003933 662.529