Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01687 ATGAACAAGATGAGCAACTTGAGCTCAGTGAACAGTTGTGATCTGATAGATGCCAAGCTTGAAGAGCATCAATTGTGCGGATCCAAGCAGTGCCCTGGTTGCGGACACAAGTTTGAAACCAAACCGGACTGGTTAGGTCTTCCGGCTGGCGTGAAGTTTGATCCAACGGATCAAGAACTAATCGAACACCTCGAAGCCAAAGTGGAGTCCAAGAATATGAAATCTCACCCTTTGATCGATGAGTTCATCCCTACCATTGAAGGAGAAGACGGAATTTGTTATACCCACCCAGAGAAACTCCCAGGAGTAACAAGAGACGGGTTGAGCAGGCACTTTTTTCACAGACCATCGAAGGCATACACGACAGGAACAAGAAAGAGGAGGAAAATACAGAATGAGAGCGAGATGCAAGGCGGAGAAACACGGTGGCACAAGACGGGAAAGACGCGGCCGGTGATGGTGAACGGCAAGCAAAAGGGCTGCAAGAAGATTCTAGTACTCTACACCAACTTCGGCAAGAACCGAAAGCCTGAAAAAACCAACTGGGTCATGCACCAGTACCACCTTGGACAACATGAGGAGGAGAAAGAAGGAGAGCTTGTCGTATCCAAGATTTTCTACCAGACACAGCCACGCCAATGTAACTGGTCCGATCGAAGCGCCACCACCGGCGAACCCAGCGGCGGCGACTTCGTTGTTACTGCCAATAGTAGTAGAAGAGACAGTGCCAGTGGAAGTTGCTCTTCTTCTAAGGACATTAACAACGTTGTTGTTACAGCCCACCGGGACGATCAGATGTCGGCTGTCGTCGGCGTTGTTCCTCCGCCCATGTCATCCTACGTTCATCATCATCATGGCTTGGATATGCAACAACACCTCAAACCCGACCATTTTGGATTCATTCCGTTTAGGAAGAGCTTCGACGAGGGGGGAATAGGAGAGGGTTCGATGGGGAGAGATCAGGTGCAGTCGGCATCAGGAGAAGAAGTTAATGAAGGACAAAGGCAACAACAACAACAACATCATCAAGTGGCTCAGCATCTACATCAACATCAGCATCATCATCATCAGAATATGAATAGCACGGCCTTTCATATAAGTAGGCCTTCACTTCCGATCTCAACCCTAATCTCTCCACCGCCTCTCCACCATACTTCAATCATCCTTGATGATAACTCGTACCATGCCTCCAGAATTATGCTCCAAAATGACAACTTTCAGCAACAGGAGCAGCAACATCATAAACTAGGAGGGAGCTCTGCGTCTGGTTTGGAGGAACTCATAATGGGATGCACTTCTTCAACTGATATTAAAGCGGAATCATCTGTCTCCGTCACAAACCCTCAAGAAGCTGAATGGCTTAAATACTCTTACTGGCCCGACCCGGATAACCCGGATCATCACGGTTAA 1410 0.4823 MNKMSNLSSVNSCDLIDAKLEEHQLCGSKQCPGCGHKFETKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFIPTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQNESEMQGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDRSATTGEPSGGDFVVTANSSRRDSASGSCSSSKDINNVVVTAHRDDQMSAVVGVVPPPMSSYVHHHHGLDMQQHLKPDHFGFIPFRKSFDEGGIGEGSMGRDQVQSASGEEVNEGQRQQQQQHHQVAQHLHQHQHHHHQNMNSTAFHISRPSLPISTLISPPPLHHTSIILDDNSYHASRIMLQNDNFQQQEQQHHKLGGSSASGLEELIMGCTSSTDIKAESSVSVTNPQEAEWLKYSYWPDPDNPDHHG 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01687 469 FunFam NAC domain-containing protein 73 56 212 - -
Accr2g01687 469 MobiDBLite consensus disorder prediction 319 345 - -
Accr2g01687 469 Gene3D NAC domain 56 212 IPR036093 GO:0003677|GO:0006355
Accr2g01687 469 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 10 354 IPR044799 GO:0003700
Accr2g01687 469 MobiDBLite consensus disorder prediction 126 147 - -
Accr2g01687 469 MobiDBLite consensus disorder prediction 309 358 - -
Accr2g01687 469 MobiDBLite consensus disorder prediction 120 148 - -
Accr2g01687 469 MobiDBLite consensus disorder prediction 215 250 - -
Accr2g01687 469 ProSiteProfiles NAC domain profile. 47 208 IPR003441 GO:0003677|GO:0006355
Accr2g01687 469 Pfam No apical meristem (NAM) protein 48 189 IPR003441 GO:0003677|GO:0006355
Accr2g01687 469 SUPERFAMILY NAC domain 42 208 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01687 Accr-Chr2 49923103 49927435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01687 13 466 NAC Transcription Factor Family AT5G56620 51.797 1.03e-137 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g01687 NAM 2.5e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01687 - - gmx:100795246 701.434