Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01684 ATGGGGAAGGCCTGGATGATTCTGGCTTTTGATCTCCTCATTCTCCTCCATCTGGGTGCTGCAAGAGCAGCTATTGGAGTGGGCGGTGGCATTGGCGTAGGTGTCGGTGTTGGCGGCGGCGGAGTGGTTTGGGTCGGTGGCGGCGGCGGGGGGAGTAACGGCTCGCCGGAGTCTTCTTCACCGCCGAAGCAAGACAAAGCTTACACTGCTCTCCAGGCGTGGAAAGCAGCGATAACAGATGACCCGTTGAGGATTCTGGAGAGTTGGAATGGTTCTAATGTGTGTTCTTATAAAGGTGTGTTTTGTGCCAACCCTGAGGATGCTTCCGGCGAGCCAGTAGTCGCCGGAATAGATCTCAACCACGCGAATCTCAGAGGAAGTCTTGTAAAAGAGCTCTCTTTACTTACTGAAATGTCTCTACTTCACCTCAACAGTAATAGATTTACAGGTACAGTTCCTGATACATTCAGAGACCTCTCGTCTCTTGAAGAGTTAGACCTCAGCAACAACCAGCTCTCTGGTCCTTTCCCCACAGTGACCTTATCAATGCCCAGGCTGGTTTACTTGGACATCAGATTCAACTCTTTCTCTGGGACACTCCCGGATGATCTTTTCAACAAGAACCTGGATGCTATTTTCCTCAACAACAATCAATTCGAGGGCGAAATCCCCCAAAATTTGGGCAATTCCCCTGCTTCAGTCATCAATTTAGCTAACAACAAGTTCAGTGGAAGCATCCCAGCTAGTTTTGGCTTCATGGGTTCTAAGCTGAAAGAGATTCTCTTCCTCAATAATCAATTAACTGGGTGTATTCCTGAAGGGGTTGGGATCTTCACACAGATGCAAGTTCTTGATGTGAGCTACAATTCACTAATGGGTCATTTGCCTGACACAATTTCTTGTCTTCAAGACATACAAGTTCTGAATTTGGCACATAACAAGCTATCTGGGGAATTATCAGATGTGATCTGCTCACTGAGAAGCCTGTTGAATCTAACAGTTGCGTATAATTTCTTTTCTGGGTTCAGCCAGGAATGCTCGAGGCTTTCCGTTAGGAATGTGGGTTTTGATTTCTCAGATAACTGCATTCCTGGGAGGGACATGCAGAGACCTCAACCACAGTGTTCTGTGATCCCAGGTGGTGGCTTGAATTGTCTCAGAATCCCAACTCCGAAGCTTATTTGTGGTTCGCTTTCTGTAAGTTTCTCGAAGCAAACCCATCCCACTCCATCTCCTTCTCCTTCTTCTTCACCTTGA 1257 0.4733 MGKAWMILAFDLLILLHLGAARAAIGVGGGIGVGVGVGGGGVVWVGGGGGGSNGSPESSSPPKQDKAYTALQAWKAAITDDPLRILESWNGSNVCSYKGVFCANPEDASGEPVVAGIDLNHANLRGSLVKELSLLTEMSLLHLNSNRFTGTVPDTFRDLSSLEELDLSNNQLSGPFPTVTLSMPRLVYLDIRFNSFSGTLPDDLFNKNLDAIFLNNNQFEGEIPQNLGNSPASVINLANNKFSGSIPASFGFMGSKLKEILFLNNQLTGCIPEGVGIFTQMQVLDVSYNSLMGHLPDTISCLQDIQVLNLAHNKLSGELSDVICSLRSLLNLTVAYNFFSGFSQECSRLSVRNVGFDFSDNCIPGRDMQRPQPQCSVIPGGGLNCLRIPTPKLICGSLSVSFSKQTHPTPSPSPSSSP 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01684 418 Pfam Leucine rich repeat N-terminal domain 68 102 IPR013210 -
Accr2g01684 418 SMART LRR_typ_2 183 207 IPR003591 -
Accr2g01684 418 SMART LRR_typ_2 159 182 IPR003591 -
Accr2g01684 418 SMART LRR_typ_2 302 326 IPR003591 -
Accr2g01684 418 SMART LRR_typ_2 135 158 IPR003591 -
Accr2g01684 418 FunFam Leucine-rich repeat receptor protein kinase EMS1 246 345 - -
Accr2g01684 418 Gene3D Ribonuclease Inhibitor 234 369 IPR032675 -
Accr2g01684 418 Pfam Leucine rich repeat 139 195 IPR001611 GO:0005515
Accr2g01684 418 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 58 414 - -
Accr2g01684 418 FunFam Leucine-rich repeat extensin-like protein 1 68 229 - -
Accr2g01684 418 SUPERFAMILY L domain-like 68 361 - -
Accr2g01684 418 PRINTS Leucine-rich repeat signature 162 175 - -
Accr2g01684 418 PRINTS Leucine-rich repeat signature 302 315 - -
Accr2g01684 418 Gene3D Ribonuclease Inhibitor 64 233 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01684 Accr-Chr2 49862388 49863644 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01684 62 398 Leucine-rich Repeat extension Gene Families AT3G24480 50.148 3.70e-108 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01684 - - gsj:114407518 574.704