Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr2g01623 | ATGGACCCTCCTCCCAAGAGCTGGAGCATCTACACCCGAGCTGAGATTCTGGCCAAGTACCAAGTCATGGAGCGGGTCGGCTCTGGAACTTACTCCGACGTCTACAAAGGCCGCCGTCTCTCCGATGATCTCATCGTCGCCCTCAAAGAAATTCACGATTACCAATCTGCCATGCGAGAAATCGAGGCCTTGCAGATCCTCCAGGGGTCCCCTAACGTCGTCGTCTTGCACGAGTACTTCTGGCGCGAGGACGAGGACGCCGTCCTCGTTCTTGAGTTTTTGAGAACTGACTTGTTGACCGTCATCAAAGAGGCCAAGAAGGAGGGTGCGGGTCTAAGCGTTGGGGAGATTAAGCAGTGGATGTTCCAGATTCTTTGCGGCGTCGATGCGTGCCACGCAAATATGATCATGCATCGAGATTTGAAGCCCAGTAATTTGTTGATTTCGGAGGATGGCGTGCTGAAATTGGCTGATTTTGGACAGGCACGGATACTTATGGAGCCTGGATTTCATGCTGTGGATGAGAACCCATCACCATATGAAGACGTTATTTCAAATCATGAGAGATCTCTTCAACATCCTGAAGCATTTCCTCAGACACACAGCCAAAACCAAGATGGCTATGGAAATCAGGAACAGAGAGCTGTAACTCAAGATGAATATTATAGAGTATTAGATGAGATAAAAACTAAGAGCTCGACAGATGACATGGATAAGGATACGAACTTCCAGGATGGAAATACGTCTTGTCTTGCAACTTGCACAATAAGTGACGTAGAAGATGATTTTATGAAGGGTTCGTTTACTTATGAAGCAGATGCCAGAGACAATGAAGAAGGTGGTCTCACATCATGTGTTGGAACCCGATGGTACAGGTCTCCTGAACTGCTTTATGGATCTGATGACTATGGGTTAGAGATTGATCTCTGGTCATTGGGCTGCATCTTCGCAGAGATCCTAACTCTGGAGCCCTTATTTCCAGGGACAAGCGATATTGATCAGCTCAGTAGAATTATTGACGTTTTAGGCAACCTCAATGAGGAAGTTTGGCCTGCTTGTTCCAAGCTTCCTGATTATGAAAAAATCTCGTTCACTAAGGTGGAGAACCCTCCAGGTATTGAAGGCTGCCTGCCCAACCGATTGCCTGATGAAGTCTCTCTAGTGAAGAAACTGGTTTGTTATGATCCAGCTAGAAGAGCTACAGCAATGGAGCTTCTCCAAGACAGGTACTTTGGTGAAGAACCTCTTCCTATACCTATTTCTAAGCTGCGAGTTCCTTTGACAAGGAGTGCTCACGATGAAGACTCTCATAATCTTGATGATCTGGATTTATCTGATTGTGAGGACTTTAACCCAGTGAATGTCATAAAAACTGGCACTGGTTTCTCCATACAATTTCCCTGA | 1404 | 0.4623 | MDPPPKSWSIYTRAEILAKYQVMERVGSGTYSDVYKGRRLSDDLIVALKEIHDYQSAMREIEALQILQGSPNVVVLHEYFWREDEDAVLVLEFLRTDLLTVIKEAKKEGAGLSVGEIKQWMFQILCGVDACHANMIMHRDLKPSNLLISEDGVLKLADFGQARILMEPGFHAVDENPSPYEDVISNHERSLQHPEAFPQTHSQNQDGYGNQEQRAVTQDEYYRVLDEIKTKSSTDDMDKDTNFQDGNTSCLATCTISDVEDDFMKGSFTYEADARDNEEGGLTSCVGTRWYRSPELLYGSDDYGLEIDLWSLGCIFAEILTLEPLFPGTSDIDQLSRIIDVLGNLNEEVWPACSKLPDYEKISFTKVENPPGIEGCLPNRLPDEVSLVKKLVCYDPARRATAMELLQDRYFGEEPLPIPISKLRVPLTRSAHDEDSHNLDDLDLSDCEDFNPVNVIKTGTGFSIQFP | 467 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr2g01623 | 467 | MobiDBLite | consensus disorder prediction | 192 | 212 | - | - | |
Accr2g01623 | 467 | Pfam | Protein kinase domain | 279 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr2g01623 | 467 | Pfam | Protein kinase domain | 20 | 167 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr2g01623 | 467 | SMART | serkin_6 | 20 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr2g01623 | 467 | Gene3D | Transferase(Phosphotransferase) domain 1 | 246 | 417 | - | - | |
Accr2g01623 | 467 | ProSiteProfiles | Protein kinase domain profile. | 20 | 411 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Accr2g01623 | 467 | MobiDBLite | consensus disorder prediction | 191 | 212 | - | - | |
Accr2g01623 | 467 | Gene3D | Transferase(Phosphotransferase) domain 1 | 12 | 208 | - | - | |
Accr2g01623 | 467 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 136 | 148 | IPR008271 | GO:0004672|GO:0006468 | |
Accr2g01623 | 467 | FunFam | Cyclin-dependent kinase F-1 | 11 | 105 | - | - | |
Accr2g01623 | 467 | PANTHER | CELL DIVISION PROTEIN KINASE | 19 | 417 | - | - | |
Accr2g01623 | 467 | ProSitePatterns | Protein kinases ATP-binding region signature. | 26 | 49 | IPR017441 | GO:0005524 | |
Accr2g01623 | 467 | SUPERFAMILY | Protein kinase-like (PK-like) | 4 | 438 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr2g01623 | Accr-Chr2 | 48824293 | 48826185 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr2g01623 | 4 | 467 | Core Cell Cycle Gene Families | AT4G28980 | 61.975 | 0.0 | 597 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CCRK | Accr2g01623 | Pkinase | 2.3e-33 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr2g01623 | - | - | pcin:129306938 | 806.979 |