Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01623 ATGGACCCTCCTCCCAAGAGCTGGAGCATCTACACCCGAGCTGAGATTCTGGCCAAGTACCAAGTCATGGAGCGGGTCGGCTCTGGAACTTACTCCGACGTCTACAAAGGCCGCCGTCTCTCCGATGATCTCATCGTCGCCCTCAAAGAAATTCACGATTACCAATCTGCCATGCGAGAAATCGAGGCCTTGCAGATCCTCCAGGGGTCCCCTAACGTCGTCGTCTTGCACGAGTACTTCTGGCGCGAGGACGAGGACGCCGTCCTCGTTCTTGAGTTTTTGAGAACTGACTTGTTGACCGTCATCAAAGAGGCCAAGAAGGAGGGTGCGGGTCTAAGCGTTGGGGAGATTAAGCAGTGGATGTTCCAGATTCTTTGCGGCGTCGATGCGTGCCACGCAAATATGATCATGCATCGAGATTTGAAGCCCAGTAATTTGTTGATTTCGGAGGATGGCGTGCTGAAATTGGCTGATTTTGGACAGGCACGGATACTTATGGAGCCTGGATTTCATGCTGTGGATGAGAACCCATCACCATATGAAGACGTTATTTCAAATCATGAGAGATCTCTTCAACATCCTGAAGCATTTCCTCAGACACACAGCCAAAACCAAGATGGCTATGGAAATCAGGAACAGAGAGCTGTAACTCAAGATGAATATTATAGAGTATTAGATGAGATAAAAACTAAGAGCTCGACAGATGACATGGATAAGGATACGAACTTCCAGGATGGAAATACGTCTTGTCTTGCAACTTGCACAATAAGTGACGTAGAAGATGATTTTATGAAGGGTTCGTTTACTTATGAAGCAGATGCCAGAGACAATGAAGAAGGTGGTCTCACATCATGTGTTGGAACCCGATGGTACAGGTCTCCTGAACTGCTTTATGGATCTGATGACTATGGGTTAGAGATTGATCTCTGGTCATTGGGCTGCATCTTCGCAGAGATCCTAACTCTGGAGCCCTTATTTCCAGGGACAAGCGATATTGATCAGCTCAGTAGAATTATTGACGTTTTAGGCAACCTCAATGAGGAAGTTTGGCCTGCTTGTTCCAAGCTTCCTGATTATGAAAAAATCTCGTTCACTAAGGTGGAGAACCCTCCAGGTATTGAAGGCTGCCTGCCCAACCGATTGCCTGATGAAGTCTCTCTAGTGAAGAAACTGGTTTGTTATGATCCAGCTAGAAGAGCTACAGCAATGGAGCTTCTCCAAGACAGGTACTTTGGTGAAGAACCTCTTCCTATACCTATTTCTAAGCTGCGAGTTCCTTTGACAAGGAGTGCTCACGATGAAGACTCTCATAATCTTGATGATCTGGATTTATCTGATTGTGAGGACTTTAACCCAGTGAATGTCATAAAAACTGGCACTGGTTTCTCCATACAATTTCCCTGA 1404 0.4623 MDPPPKSWSIYTRAEILAKYQVMERVGSGTYSDVYKGRRLSDDLIVALKEIHDYQSAMREIEALQILQGSPNVVVLHEYFWREDEDAVLVLEFLRTDLLTVIKEAKKEGAGLSVGEIKQWMFQILCGVDACHANMIMHRDLKPSNLLISEDGVLKLADFGQARILMEPGFHAVDENPSPYEDVISNHERSLQHPEAFPQTHSQNQDGYGNQEQRAVTQDEYYRVLDEIKTKSSTDDMDKDTNFQDGNTSCLATCTISDVEDDFMKGSFTYEADARDNEEGGLTSCVGTRWYRSPELLYGSDDYGLEIDLWSLGCIFAEILTLEPLFPGTSDIDQLSRIIDVLGNLNEEVWPACSKLPDYEKISFTKVENPPGIEGCLPNRLPDEVSLVKKLVCYDPARRATAMELLQDRYFGEEPLPIPISKLRVPLTRSAHDEDSHNLDDLDLSDCEDFNPVNVIKTGTGFSIQFP 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01623 467 MobiDBLite consensus disorder prediction 192 212 - -
Accr2g01623 467 Pfam Protein kinase domain 279 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01623 467 Pfam Protein kinase domain 20 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01623 467 SMART serkin_6 20 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01623 467 Gene3D Transferase(Phosphotransferase) domain 1 246 417 - -
Accr2g01623 467 ProSiteProfiles Protein kinase domain profile. 20 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01623 467 MobiDBLite consensus disorder prediction 191 212 - -
Accr2g01623 467 Gene3D Transferase(Phosphotransferase) domain 1 12 208 - -
Accr2g01623 467 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Accr2g01623 467 FunFam Cyclin-dependent kinase F-1 11 105 - -
Accr2g01623 467 PANTHER CELL DIVISION PROTEIN KINASE 19 417 - -
Accr2g01623 467 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Accr2g01623 467 SUPERFAMILY Protein kinase-like (PK-like) 4 438 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01623 Accr-Chr2 48824293 48826185 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01623 4 467 Core Cell Cycle Gene Families AT4G28980 61.975 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Accr2g01623 Pkinase 2.3e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01623 - - pcin:129306938 806.979