Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01621 ATGGAAGAGGGTGACGGGGGTGATGGCCCTCCGAAGAATGTGTCGTTGGATTCTTCTGCTGCAGCGTTGCCTTTGGATGGTACAGGGAAGAAGCTAGCGAGGCAGCTCGATTTTACGGGTTTTGCTGGGGTATCGGGTACTGTGGCTTCAAGCCAACATCTGCAATTGCAACTTCAGCCTCGGGCACATCCACAGTTACTGCCTCAAGGACTGGCACAACAAACCATGGCTGTGATGCCAGTGCTGCCGCAAGTACCTCATTCTGCAGTGAGGGTTGGGAAACCAGAATCTCCAAAATCAAGATCAAGACCTAACTTTGAAATGAAAGACTCGACTCCAAAGAAGCAAAAACAGTGCAATTGTAAGCACTCGAGATGCTTAAAGTTATACTGCGAATGTTTTGCATCAGGAATATATTGTGAGGGGTGCAACTGTGTAAATTGTTTTAACAATGTTGAGAATGATGAGGCAAGACGGGAGGCTGTTGACGCTACTTTAGAGCGCAATCCAAATGCATTTAGGCCAAAAATTGCCAGCAGCCCTCATGGAACACGTAATAGCAGGGATGAGACGGGAGAAGTTTTACTTTTGGGAAAGCACAACAAGGGCTGCCACTGTAAAAGATCAGGATGCCTCAAAAAGTACTGTGAATGCTTCCAAGCCAACATTCTCTGCTCTGAAAATTGCAAATGCCTGGACTGCAAAAATTTTGAGGGAAGTGAAGAAAGACAAGCTTTATTCCATGGAGATCAAAATAACAACATAGCATATACTCAGCAGGCAGCAAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGTTATTCATCCCCTCCAGTATCCAAGAAAAGAAAAGGTCAGGAGCACTTTTTTGGGCCAACAGTCAAGGATCCATCTGTTGGCAGGCTTGGGCAGTTTCAACCGCCAAACAATGTCTCCCAAGTTCCTGCTCCATCCTCTTCCTCGCCTTCTGTCCCTGGTGCTTGGGTCGGAAGTGCTGCAGTAGGTCCTTCAAATTTTGCGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACTTGAAGGAACTTTGCTCTGTTCTGGTGCTAGTATCAGGACAAGCTGCGAAGACACACTCAGGACCAGATCAGAAAAATTTAATGGACAAGAAGCGAATTGAAGATCAGACAGAGACTGTCCTTGCTTCATCAACTCAACAGCAATTGCCTAGTCAAATGGAAACTGACATCGAGAAAACTGTGGCTGATGATTGTTTGAGTGCAAACCAGACAGATAAAGTTGGCCCAGATGATTCCAGTTCAGATGGTGCTGATGTCTCAAGGGGGAGGCCAATGTCTCCTGGAACTCTCGCCTTGATGTGCGATGAGCAAGATGCAATGTTCATGACAGCTCCCTCTCCTAGTGGTTTGATGGCTCAAGCCTGCACCATATCTTTACAGTCTGCTCCTGGACAAGGCATGACAGCGGCGCATGCAGAGCAAGAAACGATTGTATTGACAAAGTTCAGAGATTTTCTGAATAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGCATTCTTCATTAGCTAGAAGTGTATTGGAGACTCAAAAGGATCCGGTCAGCAATAATGTTGGAAGTACAAGTACTAAGACACCACAACATCAGGTTGCCGCTAGTAATGGTGTTGTCAAAGCTGCAGTCCCACCCATGGCCACAAGTATGAACATAATAACTTCAACAACTTTAATTCCTAATAATATTATTCCTGAAAACGGGGAAAGTAAGCCAAAGATTGAAAAGGAGATATGA 1797 0.4519 MEEGDGGDGPPKNVSLDSSAAALPLDGTGKKLARQLDFTGFAGVSGTVASSQHLQLQLQPRAHPQLLPQGLAQQTMAVMPVLPQVPHSAVRVGKPESPKSRSRPNFEMKDSTPKKQKQCNCKHSRCLKLYCECFASGIYCEGCNCVNCFNNVENDEARREAVDATLERNPNAFRPKIASSPHGTRNSRDETGEVLLLGKHNKGCHCKRSGCLKKYCECFQANILCSENCKCLDCKNFEGSEERQALFHGDQNNNIAYTQQAANAAITGAIGSSGYSSPPVSKKRKGQEHFFGPTVKDPSVGRLGQFQPPNNVSQVPAPSSSSPSVPGAWVGSAAVGPSNFAYRSLLADIIQPQHLKELCSVLVLVSGQAAKTHSGPDQKNLMDKKRIEDQTETVLASSTQQQLPSQMETDIEKTVADDCLSANQTDKVGPDDSSSDGADVSRGRPMSPGTLALMCDEQDAMFMTAPSPSGLMAQACTISLQSAPGQGMTAAHAEQETIVLTKFRDFLNRVITMGEINETKHSSLARSVLETQKDPVSNNVGSTSTKTPQHQVAASNGVVKAAVPPMATSMNIITSTTLIPNNIIPENGESKPKIEKEI 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01621 598 MobiDBLite consensus disorder prediction 304 326 - -
Accr2g01621 598 MobiDBLite consensus disorder prediction 87 113 - -
Accr2g01621 598 SMART CXC_2 199 240 IPR033467 -
Accr2g01621 598 SMART CXC_2 114 154 IPR033467 -
Accr2g01621 598 MobiDBLite consensus disorder prediction 422 450 - -
Accr2g01621 598 PANTHER TESMIN/TSO1-RELATED 50 516 IPR028307 -
Accr2g01621 598 MobiDBLite consensus disorder prediction 276 326 - -
Accr2g01621 598 ProSiteProfiles CRC domain profile. 115 239 IPR005172 -
Accr2g01621 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 116 151 IPR005172 -
Accr2g01621 598 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 202 236 IPR005172 -
Accr2g01621 598 MobiDBLite consensus disorder prediction 94 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01621 Accr-Chr2 48795108 48803432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01621 2 526 CPP Transcription Factor Family AT4G29000 55.009 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Accr2g01621 TCR 4.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01621 - - qsa:O6P43_007909 810.061