Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01608 ATGTCAACCTCGCCGTCTCCCGGAGCTTCTCCGGTGCCGTCTACCAACACAACTTCTCCTCCTCCGCCCACTACCAACACAACCTCTCCTCCTCCGCCCACTACCAACACAACCTCTCCTCCTCCGCCCTCGGCCACCCCTACTGCACCACCTCCTGCTACTCCCTCCGCTCCACCACCGGCTACTCCTTCACCTCCGCCGCCGGCCACGACGACTCCCACTCCTCCATCTACCTCTCCACCGCCGCCTACGTCTGATACCAATTCTCCACCGCCTCCGGTGACTCGGAGCTCACCTCCTCCTCCGCCGTCCGGTTCATCCACACCTTCGACTCCGACTCAAAGCTCGCCTCCACCGCCTTCGTCCCCTTCTTCGTCGACGACTGTACCAACTGCTGCTATTGTTGGAATCGCTTTTGGTGTTGTGGCGATTCTTGCAATTTTAATCCTTCTTTGCGTATGTTGTCGGAGGAAGAAGAGGAGAACAAGTAATGCAGAATACTATGTGCCACCACAGGAACCTAAAGGTGACCAATATGGTGGCCCACCACGTCAGTGGCAACATAATGCTCCTCCTCCTTCAGATAATGTTGTCTCCGTGATGCAAAAGCCCCCACCACAATTACCAGCTTATGCCGCTAAACCTCCTCCGCTACCACTATTCCTGAGCAGCAGTGGTGGGTCAGGTTCCAACCATTCAGGTGGCGAAAATCCACACCGACCCCCTTCTCCTGGCATTCAATTGGGTTTCTCAAAAAGCACATTTACATATGAAGAGTTGGTACGGGCAACAGATGGGTTCTCTGATGCCAACCTCCTTGGACAAGGTGGATTTGGATATGTGCACAAAGGAATCCTGCCGAATGGGAAGGAGGTGGCAATCAAGCAGCTGAAGGCTGGAAGTGGGCAGGGAGAACGAGAATTTCAAGCAGAAGTTGAGATCATTAGCCGAGTTCATCACAGACATCTTGTTTCTCTGGTTGGATACTGTATCACTGGACACCAGAGATTGCTTGTTTATGAATTTGTTCCGAACAATACTTTGGAATTTCACTTGCATGGAAAAGGGCGACCAACTATGGATTGGCCCACAAGACTGAAAATTGCATTAGGATCAGCAAAAGGATTGGCGTATCTCCATGAGGATTGTCATCCTAAGATCATCCATCGTGATATCAAAGCTGCCAATATCCTTCTAGATTTCAAGTTTGAAGCAAAGGTTGCTGATTTTGGGCTAGCAAAGTTTTCTCCTGATGTTAATACTCATGTTTCCACTCGAGTGATGGGGACTTTTGGGTATCTGGCTCCAGAATATGCTTCTAGTGGGAAACTCTCAGACAAATCAGATGTTTTCTCCTTTGGGGTCATGCTTCTGGAGCTAATCACTGGACGTCGACCAGTTGACACAACTCATACTTTCATGGATGATAGTCTGGTAGAGTGGGCAAGGCCTTTGCTTATCCGTGCTTTGGAAGAGCATGATTTTGATTCTGTTGTTGATCCAAGGCTCAAAGATGAATATGACGTCAATGAAATGACTCGCATGGTTGCATGTGGCGCAGTCTGCACCCGCCATTCAGCACGTCATAGACCAAAAATGAGCCAGGTTGTTCGTGCTCTGGAAGGAGACATGTCTCTTTCAGATCTGAACGAAGGAATTAAACCTGGACACAGCTCTGCCTACAGTTTCCGAGGAAGCTCTGATTACGACACTGCACAATACAAGGAAGACATGAAAAAATTCAGGAAAATGACTTTGGGAACCCAGGAGCTTGGCGTCAGCAATGATTACAGTGCACCTACGAGTGACAACAGCTTATACCCATCTGGCTCAAGCAGCGAAGGCCAGAGCCGCCAGACCACCCGGGAAATGGAATTGAGAAAGATGAAGAACCACCAAGTTTACAGTGGAAGCTCTTGA 1920 0.4964 MSTSPSPGASPVPSTNTTSPPPPTTNTTSPPPPTTNTTSPPPPSATPTAPPPATPSAPPPATPSPPPPATTTPTPPSTSPPPPTSDTNSPPPPVTRSSPPPPPSGSSTPSTPTQSSPPPPSSPSSSTTVPTAAIVGIAFGVVAILAILILLCVCCRRKKRRTSNAEYYVPPQEPKGDQYGGPPRQWQHNAPPPSDNVVSVMQKPPPQLPAYAAKPPPLPLFLSSSGGSGSNHSGGENPHRPPSPGIQLGFSKSTFTYEELVRATDGFSDANLLGQGGFGYVHKGILPNGKEVAIKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCITGHQRLLVYEFVPNNTLEFHLHGKGRPTMDWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAKVADFGLAKFSPDVNTHVSTRVMGTFGYLAPEYASSGKLSDKSDVFSFGVMLLELITGRRPVDTTHTFMDDSLVEWARPLLIRALEEHDFDSVVDPRLKDEYDVNEMTRMVACGAVCTRHSARHRPKMSQVVRALEGDMSLSDLNEGIKPGHSSAYSFRGSSDYDTAQYKEDMKKFRKMTLGTQELGVSNDYSAPTSDNSLYPSGSSSEGQSRQTTREMELRKMKNHQVYSGSS 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01608 639 FunFam proline-rich receptor-like protein kinase PERK1 245 342 - -
Accr2g01608 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 387 399 IPR008271 GO:0004672|GO:0006468
Accr2g01608 639 Pfam Protein tyrosine and serine/threonine kinase 272 539 IPR001245 GO:0004672|GO:0006468
Accr2g01608 639 MobiDBLite consensus disorder prediction 1 128 - -
Accr2g01608 639 SUPERFAMILY Protein kinase-like (PK-like) 241 540 IPR011009 -
Accr2g01608 639 Gene3D Phosphorylase Kinase; domain 1 245 342 - -
Accr2g01608 639 ProSitePatterns Protein kinases ATP-binding region signature. 273 295 IPR017441 GO:0005524
Accr2g01608 639 ProSiteProfiles Protein kinase domain profile. 267 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01608 639 MobiDBLite consensus disorder prediction 223 237 - -
Accr2g01608 639 PRINTS Proline rich extensin signature 7 23 - -
Accr2g01608 639 PRINTS Proline rich extensin signature 55 80 - -
Accr2g01608 639 PRINTS Proline rich extensin signature 30 47 - -
Accr2g01608 639 Gene3D Transferase(Phosphotransferase) domain 1 343 551 - -
Accr2g01608 639 SMART serkin_6 267 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01608 639 MobiDBLite consensus disorder prediction 14 125 - -
Accr2g01608 639 MobiDBLite consensus disorder prediction 166 248 - -
Accr2g01608 639 FunFam Proline-rich receptor-like protein kinase PERK1 343 551 - -
Accr2g01608 639 MobiDBLite consensus disorder prediction 592 619 - -
Accr2g01608 639 MobiDBLite consensus disorder prediction 592 639 - -
Accr2g01608 639 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 140 601 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01608 Accr-Chr2 48598279 48601882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01608 87 622 Trihelix Transcription Factor Family AT1G70460 49.909 1.27e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Accr2g01608 PK_Tyr_Ser-Thr 7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01608 - - gmx:100781944 773.467