Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01601 ATGGAGCAGAACGACGAGATCGCGCCGTTCGTCATAAAGACTTACCACATAGTCAACGATCCCAGGACCGATAATCTCGTCGCTTGGGGGACTGCCAATAACAGCTTCATCGTCCTCGACCCTCTGGATTTCTCTCGATGCGTCTTACCTGCCTTTTTCAAGCACAACAACTTCTCCAGCTTCGTTCGTCAGCTCAATACCTATGGTTTCAAAAAGGTGGATCCAGATCGATGGGAGTTTGCGAACGAGTGGTTCCTGCGGGGGCAGAAGCAGCTGCTGGTGAACGTAGTGAGGAGGAAGCAGAGCAAGAATAAGAACCTTATGTGCTATCCTGAGGGGTTGGAGGAATTGGATGAGGAAGTGTTAGTGATGGAGATAGCGAGGTTGAAGGAGGAGCAGAAGGCGTTGGATAGGGAGGTGGAAGGGATCAATAAGAGGTTGGAGGCGACGGAGAGACGACCTCAGAAAATGATGGCGTTTCTGCGCAAAGTGGTGGAGGACCCTGACGTGTTATCACGCATATTGGCTGAGAGAGAAGAAAGACAGCTGGCCGAGAAGCGGCGGCGCTTGATGACGTCAGCCACCGCTGCCACCACCTCGTCTTCGTCTGGCATGGCTGTCAACACAAAGGTGGAAGAAGACGAGGTGACTGTGGGAGTTTTCATTTCTTCGTTGTCCTCGGAGACTGGTTTCGAAGATCATAATTGTTGTCAATCTTCTCTGCCGCCACAGGAATCACCGTATTGGCGGGGCCGAATTAGCCAAGCTACACTTGATAAACCGCCTTGGAGTCAGCAGAGTAATAGTGACGCCACCACGGGAACGGCGGTGGGAACAGTGTGGCCGCCTCAAGGAGGGATGTACTCGGGATGCCACGCCGGTGACGCTCAGTTGACTTATTTTACCGATGTGGCGCCGGAGACTCAAAGCAAACCGCCGCCTTATCCATTTTCGCTGTTGGAATGGGGCTTTTAA 975 0.5262 MEQNDEIAPFVIKTYHIVNDPRTDNLVAWGTANNSFIVLDPLDFSRCVLPAFFKHNNFSSFVRQLNTYGFKKVDPDRWEFANEWFLRGQKQLLVNVVRRKQSKNKNLMCYPEGLEELDEEVLVMEIARLKEEQKALDREVEGINKRLEATERRPQKMMAFLRKVVEDPDVLSRILAEREERQLAEKRRRLMTSATAATTSSSSGMAVNTKVEEDEVTVGVFISSLSSETGFEDHNCCQSSLPPQESPYWRGRISQATLDKPPWSQQSNSDATTGTAVGTVWPPQGGMYSGCHAGDAQLTYFTDVAPETQSKPPPYPFSLLEWGF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01601 324 SUPERFAMILY "Winged helix" DNA-binding domain 7 99 IPR036390 -
Accr2g01601 324 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01601 324 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01601 324 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01601 324 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 6 215 IPR027725 -
Accr2g01601 324 ProSitePatterns HSF-type DNA-binding domain signature. 49 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01601 324 Coils Coil 119 153 - -
Accr2g01601 324 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01601 324 FunFam Heat stress transcription factor B-4 2 100 - -
Accr2g01601 324 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Accr2g01601 324 Gene3D - 2 100 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01601 Accr-Chr2 48440119 48441191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01601 7 198 HSF AT3G24520 59.184 3.98e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Accr2g01601 HSF_DNA-bind 1.7e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01601 K09419 - jre:108979361 324.709