LGRPv2

Gene search

Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g01601	324	SUPERFAMILY	"Winged helix" DNA-binding domain	7	99	IPR036390	-
	Accr2g01601	324	PRINTS	Heat shock factor (HSF) domain signature	48	60	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Accr2g01601	324	PRINTS	Heat shock factor (HSF) domain signature	10	33	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Accr2g01601	324	PRINTS	Heat shock factor (HSF) domain signature	61	73	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Accr2g01601	324	PANTHER	HEAT SHOCK TRANSCRIPTION FACTOR	6	215	IPR027725	-
	Accr2g01601	324	ProSitePatterns	HSF-type DNA-binding domain signature.	49	73	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Accr2g01601	324	Coils	Coil	119	153	-	-
	Accr2g01601	324	Pfam	HSF-type DNA-binding	10	99	IPR000232	GO:0003700\|GO:0006355\|GO:0043565
	Accr2g01601	324	FunFam	Heat stress transcription factor B-4	2	100	-	-
	Accr2g01601	324	SMART	hsfneu3	6	99	IPR000232	GO:0003700\|GO:0006355\|GO:0043565

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g01601	Accr-Chr2	48440119	48441191	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr2g01601	7	198	HSF	AT3G24520	59.184	3.98e-79	243

Showing 1 to 1 of 1 entries

Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HSF	Accr2g01601		HSF_DNA-bind	1.7e-28	CL0123

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g01601	K09419		-	jre:108979361	324.709

Showing 1 to 1 of 1 entries