Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01541 ATGGAGAACCAGAAACAGATTGTAATTCCTGTTTTCTATAACATAGATCCTTCACATGTGAGGCATCAAAAAGGGTCTTATGGAGATGCTTTAGCCAAACATGATGAATATTATAAGGAAAAGGTGCCAATTTGGAGATCAGCTTTGAATAAAGCTGCTAACTTATCCGGGTTCCATTATTCATCAAATTATGAGGATGAGGCTGAGTTTATAGAAAAGATTGCCAAAACTTTGTCAAGAAGGTTGAATCTTATGTACAAAAGTGACTTTAGAGACCTTGTTGGAATTGATGAAAGAATTGCAGATTTGGAATCACTAATGGACCAAAGATCAGAAGATGTTCGTGTCATTGGAATTTGGGGTATGGGCGGTATTGGTAAGACAACCATCGCCGCTGTAGTGTTTAATCGATTTTGTTCTGAATTTGAAGGACATTGTTTTTTAGCCAATGTGAGAGAAGAGTCAAAGAATCATGGAATTATTCATTTGAAGAATAAAATGTTTTCTATACTACTAAATGAAAATGATTTACATATTGTTACACCAAATGGAATACCCCCTCATGTGAAGAGAAGGCTTCTCCGAAAAAGGGTTCTTGTCGTTCTTGATGACATTAGTGATTCAGATCAACTAGAAAAATTAGTGGGAGCACTTAGTTGCTTTGGACTTGGTAGTAGAATCATTATAACAACTAGAGATAAGCAAGTGCTTGGTAAAAATGTTGATGAAATATATGAACTTAAGCCTTTGATTTTTGATGATGCTTTTCAGCTTTTTATGTTGAATGCCTTTGAGAATAATGATGTGGACTTGGAGTGGATTGTATTATCAAGAAAGGTGAGTAGTTATGCTAAAGGCATTCCTTTAGCTCTAAAAGTTTTAGGTTCCTTCCTTTATGGTAAAAGCAGGGAAGAATGGGAAAGCCAACTTGAGAAGCTCAAAAAAATGCCATATGCAAAAATTCAAGATGTGATGAGACTGAGTTATGATGATCTTGATAGAGAAGAGAAGAACATTTTCTTGTATATTGCATGTTTTCTCAAAGGATATGAGTCACAACAAATCACTGTTTTGCTGAATTCTTGTGGTTTCCCAACCATTATTGGGTTAAGGGTCCTTCGAGACAAAGCCCTTATAACTGAAGTATCAACCTCCAGGAATTCAATAATATCGATGCATGATTTAATACAAGAAATGGGTTGGGAAATTGTTCGTGAAGAATCCATTGACAACCCCGGAAAACGTAGCCGATTATGGGATGCTAATGATATTTCTCTAGTATTAGAACATAACATGGGCACTAAAGCCATTCAAAGCATTAGTCTAAATGTGGCAAAAATTGAAGGGCTCTGTTTAAATCCTCAAGTCTTTTCTAAGATGACAGAGCTAAAGCTTCTCAGGTTTTCCCAATATGATTTTCATGAACAAATCCTCCACCTTCCTCAAGGCCTTGATTCTTTGCCAAATGGACTGAGATTTTTTGAGTGGGTTTGTTATCCTTTAAGATCCTTGCCTTCGTCATTCTGTCCTAAAAGTCTTGTTGAACTTAAAATGACTTGGAGTCGCGTGGAAAAGCTTTGGGATGGAGTTTTGGATCTTGTGAATTTAAAGAAAATTGACCTCAGTAACTCCAAGAATCTGTTGGAACTTCCAGATTTTTCCATGGCGAAAAACCTTGAAGAAGTAGAACTCTACAACTGCAAGAGCATGCGTAAGGTTCATCCTTCTATATTAACCATCCACAAGCTTGTGAAACTGAACCTATCATACTGCAAATCACTTACCATCCTTAAAGGTGATGTCCATTTAAGATCCCTTAGTAACCTTTCTCTTAGTGAATGCTCAAAGCTCAAGCAATTCTCAGTGACATCAGAGAATATGAAGAACTTAAGTTTGAAAGGCACATCCATCAATGAATTGCCTTTGTCCATGAGGCTTCTAAACAAACTTGAAACATTATACTTAGATCGCTGTCAAAATCTGAAGAATCTTCCAAACAAGTTTTCTAACCCAGTTCTCTTAGAGAACTTCGAATCATCGGCTGCGCGCAGCTTGATGCATCGAATCTACACTTACTTCTTGAAGGCTCTTTGCTCCTAG 2100 0.3686 MENQKQIVIPVFYNIDPSHVRHQKGSYGDALAKHDEYYKEKVPIWRSALNKAANLSGFHYSSNYEDEAEFIEKIAKTLSRRLNLMYKSDFRDLVGIDERIADLESLMDQRSEDVRVIGIWGMGGIGKTTIAAVVFNRFCSEFEGHCFLANVREESKNHGIIHLKNKMFSILLNENDLHIVTPNGIPPHVKRRLLRKRVLVVLDDISDSDQLEKLVGALSCFGLGSRIIITTRDKQVLGKNVDEIYELKPLIFDDAFQLFMLNAFENNDVDLEWIVLSRKVSSYAKGIPLALKVLGSFLYGKSREEWESQLEKLKKMPYAKIQDVMRLSYDDLDREEKNIFLYIACFLKGYESQQITVLLNSCGFPTIIGLRVLRDKALITEVSTSRNSIISMHDLIQEMGWEIVREESIDNPGKRSRLWDANDISLVLEHNMGTKAIQSISLNVAKIEGLCLNPQVFSKMTELKLLRFSQYDFHEQILHLPQGLDSLPNGLRFFEWVCYPLRSLPSSFCPKSLVELKMTWSRVEKLWDGVLDLVNLKKIDLSNSKNLLELPDFSMAKNLEEVELYNCKSMRKVHPSILTIHKLVKLNLSYCKSLTILKGDVHLRSLSNLSLSECSKLKQFSVTSENMKNLSLKGTSINELPLSMRLLNKLETLYLDRCQNLKNLPNKFSNPVLLENFESSAARSLMHRIYTYFLKALCS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01541 699 Gene3D - 1 84 IPR035897 -
Accr2g01541 699 ProSiteProfiles TIR domain profile. 1 82 IPR000157 GO:0007165
Accr2g01541 699 SUPERFAMILY "Winged helix" DNA-binding domain 320 428 IPR036390 -
Accr2g01541 699 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 5 671 IPR044974 GO:0006952
Accr2g01541 699 SUPERFAMILY Toll/Interleukin receptor TIR domain 2 58 IPR035897 -
Accr2g01541 699 SUPERFAMILY L domain-like 442 676 - -
Accr2g01541 699 Gene3D - 250 333 IPR042197 -
Accr2g01541 699 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 343 IPR027417 -
Accr2g01541 699 Gene3D Ribonuclease Inhibitor 419 688 IPR032675 -
Accr2g01541 699 Pfam NB-ARC domain 104 326 IPR002182 GO:0043531
Accr2g01541 699 PRINTS Disease resistance protein signature 531 547 - -
Accr2g01541 699 PRINTS Disease resistance protein signature 116 131 - -
Accr2g01541 699 PRINTS Disease resistance protein signature 284 298 - -
Accr2g01541 699 PRINTS Disease resistance protein signature 192 206 - -
Accr2g01541 699 Gene3D - 85 245 IPR027417 -
Accr2g01541 699 Pfam TIR domain 3 96 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01541 Accr-Chr2 47212944 47215398 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01541 3 683 WRKY Transcription Factor Family AT4G12020 34.659 8.74e-104 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01541 - - ccaj:109805840 894.419