Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01535 ATGAAAGCAGCCAATGCATTGGGAGCTAAAACTGCGAGAGCTTGCGATAGCTGCCTTCGCCGACGGGCTCGTTGGTTTTGCGCCGCCGATGACGCTTTCTTATGCCATGGCTGTGACAATCTTGTTCACTCTGCCAATCAGTTAGCCAGCAGACATGAAAGGGTTCGTCTTCAAACCGCTTCATCGTCCTCCAAGAAGGCTACCAAATCGCAAGTATGGTATAGTGGATTCACACGCAAGGCAAGAACCCCACGTCATAATAGCAAGCAGTTGCTATTATTGGCTCAGCAAAAATCCAAACTTGAGGAAGAGGAAGCGATTTTTAATGGTACTCTTCCCGTCGTGCCGGAGCTCGAAGAAGGTAGCGGTGGGCTGGATGAGAGCGACGAGCGGTTGCTTTGCCGGGTTCCGGAGTTTGATCCGTTTGAAGATGAGCTTTGTAATATTTACAGTGAAGTTGGGGAAGAGAGGCTGGACGACGTCGTGATGACGAAGAAGAAAGATGATGTGATGAATAGTAATGGTCCGGATGATGAAGAAGGAATAACATGTGACTTAGACAGTTTTTCGGAGTTTCTCGCGTCGGATATGGATCTTGTGGAGTTTGCTGCTGATGTTGAAAGCTTACTGGAAAGTGGGATTGATGATGAAAGTGCAGGAGCAGAACTGTTGGATTGTAAACAAGAAGAAATGATGGGAGCTTTAGAGGGTACAGTGGGGTCTGCAGACAAAAATAATGCGATGGTAAAGATTAAGGATGAACAAGTAATTGAAGCTAACAACACGGTCGAAGGTATGACAAGTGACACCTTAAATTGGAACACAACAACACCGACAATTAATCATAAGGGATCATCAGAAGAAGAAGAAGAGGAAAGGAAGGTGGAAACGAAGGCAAAGATATTTTTGAGGCTAAACTACGAGGATGTGATAAGTTCTTGGGCAGGTCAAGGTTGTCCCTGGACAACTGGAAACCCTCCTCAGTTCAACTCTAATGACTGCTGGCTTCACTTCTTGGGTTCGAGCGGAGGAGATGTTCATCAGTGCTGTTATGGGGAAATTGGTGGGATTTTGAAGGGACAAGTAGATGGGGGAAGAGAGGCAAGAGTATCGAGGTACAGAGAGAAGCGAAGAACACGTTTATTTGCGAAGAAAATAAGGTACGAAGTGAGGAAACTGAACGCAGAAAAAAGACCGCGTATGAAAGGTCGATTCGTGAAGAGGACGTCCTTTGTTGGAACCACTGCTTTGCCTGCTGCTGCTTCTTCTCACTGA 1275 0.462 MKAANALGAKTARACDSCLRRRARWFCAADDAFLCHGCDNLVHSANQLASRHERVRLQTASSSSKKATKSQVWYSGFTRKARTPRHNSKQLLLLAQQKSKLEEEEAIFNGTLPVVPELEEGSGGLDESDERLLCRVPEFDPFEDELCNIYSEVGEERLDDVVMTKKKDDVMNSNGPDDEEGITCDLDSFSEFLASDMDLVEFAADVESLLESGIDDESAGAELLDCKQEEMMGALEGTVGSADKNNAMVKIKDEQVIEANNTVEGMTSDTLNWNTTTPTINHKGSSEEEEEERKVETKAKIFLRLNYEDVISSWAGQGCPWTTGNPPQFNSNDCWLHFLGSSGGDVHQCCYGEIGGILKGQVDGGREARVSRYREKRRTRLFAKKIRYEVRKLNAEKRPRMKGRFVKRTSFVGTTALPAAASSH 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01535 424 SMART bboxneu5 10 57 IPR000315 GO:0008270
Accr2g01535 424 ProSiteProfiles Zinc finger B-box type profile. 10 57 IPR000315 GO:0008270
Accr2g01535 424 Pfam B-box zinc finger 12 55 IPR000315 GO:0008270
Accr2g01535 424 ProSiteProfiles CCT domain profile. 366 408 IPR010402 GO:0005515
Accr2g01535 424 MobiDBLite consensus disorder prediction 267 282 - -
Accr2g01535 424 MobiDBLite consensus disorder prediction 267 293 - -
Accr2g01535 424 CDD Bbox1_BBX-like 14 57 - -
Accr2g01535 424 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 410 - -
Accr2g01535 424 Pfam CCT motif 366 408 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01535 Accr-Chr2 47090069 47091857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01535 4 408 C2C2-CO-like Transcription Factor Family AT1G25440 43.448 3.86e-96 293
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Accr2g01535 zf-B_box 5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01535 - - gmx:100802113 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr2g01535 2 47090069 47091857 Accr2g01535 2 47090069 47091857 ECH