Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01529 ATGGACGAAAATAATCTGCCTCCTGGATTCAGATTCCACCCCACAGACGAAGAGCTCATAAATTATTATCTAAAAAGTAAAGTTTGTGATGCTAATGGCTTCACTTGCAAAGCTGTAGCAGTGGTTGATCTCAACAAGTCTGAACCTTGGGACCTTCCAGGTAAGGCATCGATGGGAGAGAAGGTCTGGTATTTCTTCAGTTTAAAAGATAGGAAATACCCAACAGGGCTTCGAACCAATCGAGCTACAGAATCCGGCTACTGGAAAACCACCGGCAAAGACAAACACATCTTCCACGGCGGCGCACTGGTCGGCTTCAAGAAAACCCTCGTCTTCTACCAAGGAAGAGCTCCTCGTGGCCTCAAAACCAATTGGGTTATGCATGAATATCGTCTTCACAATAATAACCTCCATTTCACACCCTCCAAGGAAGAATGGGTAGTTTGCAGGGTGTTCAAAAAGAGCATATCAGCAGCCAAGAAACCTCATCAGGAGATGACTTCATCATCTTTAGATTCACCTAATTGCGAAGCAACCTCAATGGTGAATGAACTGGGTGACGTGGTGGAACTTGCTAATTTTAGTACTAGTCTTGCAAATTCCTCAACAGGATTCACCCCAAACAACGTTAATAATGGCGATCACATCAGTAATGTAAACACAAACATGAACTTGAGCAACAATTATTGGTCATCATCAGCTGACCAAGTTCCCTCTCTTGTTCCCTGGCCTAATAATAGTACAGCATCTCGAGGGTTAATGCTTAATAATCCCAATCTGTCATCAGTGAACTCATTGCTTCTCAAAGCATTGCAGCTCAAGAGCTATCAGCAGCAGCAGCAAGTTCATGATCAGTTTGTTGCATCATCTTACATGTCGTCTCAAGCTGTTTCCAACGTTGGAGGAACCACTGATCATGTCATCGTCTCAAATCCCAGCGCTTCTCAGCAGCACCTACCCTTCAATCTCGACTCTGTCTGGTGA 984 0.4421 MDENNLPPGFRFHPTDEELINYYLKSKVCDANGFTCKAVAVVDLNKSEPWDLPGKASMGEKVWYFFSLKDRKYPTGLRTNRATESGYWKTTGKDKHIFHGGALVGFKKTLVFYQGRAPRGLKTNWVMHEYRLHNNNLHFTPSKEEWVVCRVFKKSISAAKKPHQEMTSSSLDSPNCEATSMVNELGDVVELANFSTSLANSSTGFTPNNVNNGDHISNVNTNMNLSNNYWSSSADQVPSLVPWPNNSTASRGLMLNNPNLSSVNSLLLKALQLKSYQQQQQVHDQFVASSYMSSQAVSNVGGTTDHVIVSNPSASQQHLPFNLDSVW 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01529 327 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 271 - -
Accr2g01529 327 Gene3D NAC domain 15 157 IPR036093 GO:0003677|GO:0006355
Accr2g01529 327 ProSiteProfiles NAC domain profile. 6 154 IPR003441 GO:0003677|GO:0006355
Accr2g01529 327 SUPERFAMILY NAC domain 2 154 IPR036093 GO:0003677|GO:0006355
Accr2g01529 327 Pfam No apical meristem (NAM) protein 7 132 IPR003441 GO:0003677|GO:0006355
Accr2g01529 327 FunFam NAC domain-containing protein 100-like 15 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01529 Accr-Chr2 46992483 46994521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01529 3 327 NAC Transcription Factor Family AT3G18400 50.289 1.90e-95 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g01529 NAM 2e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01529 - - gmx:100787111 343.969