Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01520 ATGGCTGAATTCACAACAGATTTTCAAAGCCTTAGGCCCTCCTCTTTGCCTTTCTTAGACATTGATCCAAACTTGGAACTTATAAACCAGTTCACAGGAATTTTGAGCCCATCACTTTTCCTGATGGAAAATTCTAGTCTCAATGTCCAGAGCTTGGTTCCTTTCTCTCATCAAGATCCCTCTGATGATTCTGGAGGAAACTTGGAGGGGAATTTCCCTGTTTTACCAGCAGGAAGTGAAATCCAGGATAGTCGAAAGAGGAAAGCCATGGATGTTATTACAGAGAACAGTTCGGTAAACCCAACTCTTGCAGCTTCTGAGAGTGGAAGAAGCAAGATCATTAGTAGTTCTGGAAGAGGTAAGAGAGCTAAAAGCAACGTAACAGAAGAAGGTAAACCAGAGGAAGTGGTTCATGTCAGAGCCAGAAGAGGTCAAGCTACAGACAGTCACAGTTTAGCAGAAAGGGTCAGAAGGGGAAAAATCAATGAAAAAATAAGACGCTTGCAGACCATTGTCCCAGGATGTTACAAGACCATGGGTATGGCAGTGATGTTGGATGAGATCATAAACTACGTCCAGTCCTTGCAGCATCAGGTGGAGTTTCTATCTATGAAGCTGACTGCTGCAAGTACCTTCTACGATTTCAATTCAGAGACAGATGCCATAGAAACAATGCAGAGAGCAAGGGCGTTCAGGGCAAAAGGATTAACCTCAAGAAATGGAAGTGAAGAAGGATATGGTGGAGGGGTTTCTGGCTTTCATCATCCAACTTGGCCTCTCTGA 783 0.4368 MAEFTTDFQSLRPSSLPFLDIDPNLELINQFTGILSPSLFLMENSSLNVQSLVPFSHQDPSDDSGGNLEGNFPVLPAGSEIQDSRKRKAMDVITENSSVNPTLAASESGRSKIISSSGRGKRAKSNVTEEGKPEEVVHVRARRGQATDSHSLAERVRRGKINEKIRRLQTIVPGCYKTMGMAVMLDEIINYVQSLQHQVEFLSMKLTAASTFYDFNSETDAIETMQRARAFRAKGLTSRNGSEEGYGGGVSGFHHPTWPL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01520 260 CDD bHLH_AtBPE_like 135 220 - -
Accr2g01520 260 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 89 219 IPR024097 GO:0006355
Accr2g01520 260 MobiDBLite consensus disorder prediction 55 87 - -
Accr2g01520 260 Pfam Helix-loop-helix DNA-binding domain 149 196 IPR011598 GO:0046983
Accr2g01520 260 MobiDBLite consensus disorder prediction 100 133 - -
Accr2g01520 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 143 213 IPR036638 GO:0046983
Accr2g01520 260 MobiDBLite consensus disorder prediction 100 122 - -
Accr2g01520 260 Gene3D - 142 213 IPR036638 GO:0046983
Accr2g01520 260 SMART finulus 151 201 IPR011598 GO:0046983
Accr2g01520 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 145 195 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01520 Accr-Chr2 46894856 46896114 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01520 55 260 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 55.263 9.36e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr2g01520 HLH 4.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01520 - - gmx:100803700 286.96