Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01518 ATGTTCACATCGAGGAAGAAAATCCACAAAGATAATAATGCTGAGCCAACTGAGTTTGAAGAGTCAGTTGGACAGGCATTGTTTGATTTGGAAAATACCAATCAGGAGCTGAAAAGTGATTTGAAAGATCTATACATAAATTCAGCTGTTCAGATTGATGTATCTGGGAACCGCAAGGCTGTGGTTATTCATGTTCCCTATAGATTAAGGAAGGCTTTTAGGAAGATTTATGTTAGGCTTGTCAGAGAGCTTGAGAAGAAATTCAGTGGGAAGGATGTAGTCTTAATTGCCACCCGGAGGATAGTGAGGCCTCCAAAGAAGGGTTCTGCCATGCAACGCCCCCGAAGCCGCACACTTACTGCTGTGCATGAAGCAATGTTGGAAGATGTTGTATTGCCTGCCGAGATTGTTGGGAAACGTGTTAGGTACCGTATTGATGGATCCAAGATTATGAAGGTTTTCTTGGACCCTAAGGAGCGAAATAACACCGAGTACAAGCTCGATACTTTTGCTGCAGTATACAGGAAGCTGTCCGGCAAAGATGTCGTCTTTGAGTATCCCGTTACAGAGCCTTAG 576 0.4358 MFTSRKKIHKDNNAEPTEFEESVGQALFDLENTNQELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKAFRKIYVRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAMQRPRSRTLTAVHEAMLEDVVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLDTFAAVYRKLSGKDVVFEYPVTEP 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01518 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Accr2g01518 191 PANTHER 40S RIBOSOMAL PROTEIN S7 1 190 IPR000554 GO:0003735|GO:0005840|GO:0006412
Accr2g01518 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Accr2g01518 191 Coils Coil 27 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01518 Accr-Chr2 46852544 46854355 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01518 1 190 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 77.368 1.01e-112 317