Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01513 ATGGCGACGCCGTTGGCTGGACTGCAGCACTTGGACGGAGGTGGAGGAGTGGCCGTGCTCTCTAATTCTGTGAACAAGGCCGATGCTTCCTCCTCCACATCCAATGGTGGCTTGAAATGCTCCGAATTGGAGTCGCCTATTCTAATTTTCTTATTCTTCCACAAGGCGATTCGAAATGAGCTTGATGCCCTCCACCGACTAGCAATGGCATTTGCCACCGGCAATCGCTCTGATTTTCAGCCGCTCTTTGACCGCTATCATTTCCTGAGATCAATTTACAGGCACCATTCCAATGCCGAAGATGAGGTGATTTTTCCAGCTCTTGATATACGTGTGAAAAATGTAGCACAGACATATTCCCTCGAACACAAGGGTGAAAGTAATCTTTTTGATCATCTATTTGAGCTGTTAAATTCTACCACCCATAATAATGAAAGTTTCTTAAGGGAGTTGGCATTCTGCACGGAAGCCCTGCAGACATCAGTTAGTCAACACATGGCTAAGGAAGAGGAGCAGGTGTTTCCTCTGCTCATTGAAAAGTTTTCTCTTGAAGAACAGGCTTCTTTAGTTTGGCAGTTTCTATGCAGTATTCCTGTGAATATGATGGCAGTATTTCTTCCATGGCTTTCAGCATCGATATCACTTGATGAATCCCAGGATCTGCGGACGTGCTTAGGCAAAATCGTGCCACAGGAAAAGCTTCTTCAAAAGGTTGTTTTCACTTGGATGGAAGGGAAAAGTGGTGCTCTCGCAGTAAAAAATTGTGCTGATCATTCATTAACCCACCAGATTGAGAAAGTGAACTGTGCATGTGAATTCACAGCAACTGGGAAAAGGAAACATTCGGAATATGGTCTAGATGTTTCTGATATTAATGGAACACATCCTATAGATGAAATATTGCTGTGGCATAATGCAATAAAAAAAGAGTTAAGTGAGATAGTGGTGGAGACCAGGAAGATACAGCTGTGTGGAGATTTTACCAATCTATCAGCTTTTAATGAAAGATTGCAATTTATCTCTGAAGTTTGCATATTTCACAGTATTGCTGAGGACAGGGTTATATTTCCAGCTGTAGATGGTGAATTTTCTTTCTTCCAGGAGCACGCCGAAGAAGAAAGCCAATTTAATGACTTTCGGAGTTTGATTGAAGATATTCAGAATGAAGAAGCAACGTCTAATTCAGAAGTTGAATTTTATTCTAAGTTATGCTCGCATGCTGATCAGATAATGGAAACTATACAAAGACATTTCCACAATGAAGAAGTTCAAGTTCTTCCACTTGCTCGGAGGCACTTTACCTTTGGAAGGCAACGTGAACTTCTATATCAAAGTTTGTGCATGATGCCTTTGAAATTGATTGAACGCGTCCTGCCATGGCTGGTAGGATCATTAACTGAAGATCAAGTGAAGATGTTTCTAAGAAATATGCAATTGGCAGCTCCAGCAACAGATTCTGCTCTAGTCACACTCTTCTGTGGTTGGGCTTGCAAGGCTCGTAATGAGGGCTTGTGTTTGTCTTCAAGTGCGCTGGGTTGCTGTCCTGCTCAAAGACTTGCTGACATTGAAGAAAACTTTGTCCAGCCATCCTGCCCTTGTGGCACTTCAGCATCACCAGTTAAAGATTGCTCATTGCTAGTTGAACTAGAAGAGAACAAAAGACCAGTTAAACGGAGCATATTGGAGTTATGCAAGAATACAGATGTCTCTGAAACTTCAGAGTCTGAAAGTATTGAGAAACAATGTTGTAGTGCAAGGTCTTGTTGTGTGCCAGGCTTGGGAGTAAGCAGTACTAATTTGGGGCAAAGCTCTCTTTCTACTGTCAAGTCCTTACGCTCCTTGTCTTTCAGCTCTTCTGCTCCATCTATAAATTCCAGTCTTTTCGTATGGGAAACAGATAATAACTCGAGTGATAACTCTACAGAAAGACCCATTGATACTATATTTAAATTTCACAAAGCTATTCGCAAAGATTTGGAGTATTTAGATATTGAATCTGGAAAGCTTACGCACGGTGATGAGACAATTCTTCGCCAGTTTACTGGAAGATTTCTTCTTTTGTGGGGTCTATATAGAGCTCACAGTAATGCTGAGGATGATATAGTATTTCCAGCTCTGGAATCTAAAGAATCCCTTCATAATGTGAGTCATTCATACATGCTGGACCATAAGCAGGAAGAAAAATTATTTGAAGATATTTCCCATGTTCTTTCTGAGCTTTCTGTCCTTCATGAAGAGTTTCAGGCGGCCAGTATGTCTGATGAAAGTAATTTTGGAACTTCTGATGTTAGCTTTAGAGATAACAACAGAAAGTACAATGAGCTGGCAACCAAACTTCAAGGGATGTGCAAATCCATAAGAGTAACACTGGATCAGCATATTTTTAGGGAAGAGCTTGAGCTCTGGCCATTGTTTGGAAGACATTTTACTGTAGAAGAACAAGACAAGATAGTGGGCCGGATAATTGGGACTACTGGTGCAGAAGTTCTACAATCAATGCTACCATGGGTAACTTCTGCACTTACCGAGGATGAACAGAACAAAATGATGGATACATGGAAGCAGGCAACAAAAAATACCATGTTCAATGAATGGCTTAATGACTGCTGGAAAGAAGGTCCAGCAGCTATATTGCAGAAAGAAACACCTGAGCAAACTTCGCCTCAAAAAGGTGCTGAACATCAGGAAAGCATGGACCTGAATGATCAAATGTTTAAGCCAGGTTGGAAAGACATATTCCGGATGAATCAGAGTGAGCTTGAGTCAGAGATCCGGAAGGTTTATCAAGACTCAACTCTTGATCCAAGAAGAAAAGCATATCTTGTGCAGAATCTAATGACTAGTCGATGGATAGCTGCACAGCAGAAGTTACCTAAAGCTACAACTGGGGATTCTTCAGATGGAGAAAGAATTGAAGGACGTTCAGCATCATTTCGAGACCATGAGAAGCAAATATTCGGATGTGAACACTATAAAAGAAACTGCAAACTGAGAGCTGCTTGCTGTGGCAAGTTGTTTACGTGTAGATTTTGCCATGACAATGTGAGCGATCACTCAATGGATAGAAAAGCAACTTCAGAAATGATGTGTATGCAATGCTTGAACATACAGCCAGCTGGGCCGAGATGCATGACGCCTTCATGTGATGGATTTTCAATGGCAAAATACTATTGCAATATATGCAAATTTTTTGATGATGAAAGGAATGTATATCATTGCCCATTTTGCAATTTGTGCCGTGTGGGGAGAGGGCTTGGGATTGATTATTTTCATTGTATGAAATGCAACTGCTGCCTGGGGATAAAATCGGCATCTCACAAGTGCCTGGAGAAAGGCCTAGAAATGAACTGCCCAATTTGCTGTGATGACTTATTCACATCAAGTGCTACAGTCAGAGCTCTACCCTGTGGTCATTATATGCATTCAGCTTGCTTTCAGGCTTACACCTGTAATCACTACACATGTCCAATCTGCAGCAAATCATTGGGTGATATGGCGGTTTACTTTGGCATGCTTGATGCTTTATTGGCTGCTGAGGAGCTCCCAGAAGAGTACAGAGACCGATATCAGGACATACTTTGCAATGACTGTGAACGAAAGGGGTGTTCTCCGTTCCACTGGTTGTATCACAAATGTGAATTTTGTGGCTCATACAATACCCGTGTGATCAAGTCCGAGCCATCAAATCCCCGCTGCTCTTAG 3702 0.4176 MATPLAGLQHLDGGGGVAVLSNSVNKADASSSTSNGGLKCSELESPILIFLFFHKAIRNELDALHRLAMAFATGNRSDFQPLFDRYHFLRSIYRHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNSTTHNNESFLRELAFCTEALQTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFLCSIPVNMMAVFLPWLSASISLDESQDLRTCLGKIVPQEKLLQKVVFTWMEGKSGALAVKNCADHSLTHQIEKVNCACEFTATGKRKHSEYGLDVSDINGTHPIDEILLWHNAIKKELSEIVVETRKIQLCGDFTNLSAFNERLQFISEVCIFHSIAEDRVIFPAVDGEFSFFQEHAEEESQFNDFRSLIEDIQNEEATSNSEVEFYSKLCSHADQIMETIQRHFHNEEVQVLPLARRHFTFGRQRELLYQSLCMMPLKLIERVLPWLVGSLTEDQVKMFLRNMQLAAPATDSALVTLFCGWACKARNEGLCLSSSALGCCPAQRLADIEENFVQPSCPCGTSASPVKDCSLLVELEENKRPVKRSILELCKNTDVSETSESESIEKQCCSARSCCVPGLGVSSTNLGQSSLSTVKSLRSLSFSSSAPSINSSLFVWETDNNSSDNSTERPIDTIFKFHKAIRKDLEYLDIESGKLTHGDETILRQFTGRFLLLWGLYRAHSNAEDDIVFPALESKESLHNVSHSYMLDHKQEEKLFEDISHVLSELSVLHEEFQAASMSDESNFGTSDVSFRDNNRKYNELATKLQGMCKSIRVTLDQHIFREELELWPLFGRHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTEDEQNKMMDTWKQATKNTMFNEWLNDCWKEGPAAILQKETPEQTSPQKGAEHQESMDLNDQMFKPGWKDIFRMNQSELESEIRKVYQDSTLDPRRKAYLVQNLMTSRWIAAQQKLPKATTGDSSDGERIEGRSASFRDHEKQIFGCEHYKRNCKLRAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMQCLNIQPAGPRCMTPSCDGFSMAKYYCNICKFFDDERNVYHCPFCNLCRVGRGLGIDYFHCMKCNCCLGIKSASHKCLEKGLEMNCPICCDDLFTSSATVRALPCGHYMHSACFQAYTCNHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRYQDILCNDCERKGCSPFHWLYHKCEFCGSYNTRVIKSEPSNPRCS 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01513 1233 Pfam Ring finger domain 1116 1158 IPR001841 -
Accr2g01513 1233 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 687 1226 - -
Accr2g01513 1233 ProSiteProfiles Zinc finger RING-type profile. 1117 1159 IPR001841 -
Accr2g01513 1233 CDD RING-H2_Pirh2-like 1116 1159 - -
Accr2g01513 1233 ProSiteProfiles Zinc finger CTCHY-type profile. 1053 1116 IPR017921 -
Accr2g01513 1233 Pfam Zinc-ribbon 1164 1221 IPR039512 -
Accr2g01513 1233 SMART ring_2 1117 1158 IPR001841 -
Accr2g01513 1233 CDD Hr-like 646 803 - -
Accr2g01513 1233 SUPERFAMILY CHY zinc finger-like 981 1044 IPR037274 GO:0008270
Accr2g01513 1233 Pfam CHY zinc finger 988 1063 IPR008913 GO:0008270
Accr2g01513 1233 CDD Hr-like 298 427 - -
Accr2g01513 1233 ProSiteProfiles Zinc finger CHY-type profile. 981 1050 IPR008913 GO:0008270
Accr2g01513 1233 SUPERFAMILY RING/U-box 1114 1169 - -
Accr2g01513 1233 FunFam Zinc finger protein-related isoform 1 1112 1161 - -
Accr2g01513 1233 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1113 1161 IPR013083 -
Accr2g01513 1233 CDD Hr-like 49 175 - -
Accr2g01513 1233 Coils Coil 369 389 - -
Accr2g01513 1233 Gene3D nmb1532 protein domain like 638 874 - -
Accr2g01513 1233 Gene3D - 1188 1228 - -
Accr2g01513 1233 FunFam Zinc finger protein BRUTUS 639 868 - -
Accr2g01513 1233 Gene3D nmb1532 protein domain like 44 195 - -
Accr2g01513 1233 Gene3D nmb1532 protein domain like 298 445 - -
Accr2g01513 1233 SUPERFAMILY Zinc hairpin stack 1054 1110 IPR037275 -
Accr2g01513 1233 Pfam Hemerythrin HHE cation binding domain 51 177 IPR012312 -
Accr2g01513 1233 Pfam Hemerythrin HHE cation binding domain 295 429 IPR012312 -
Accr2g01513 1233 Pfam Hemerythrin HHE cation binding domain 644 804 IPR012312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01513 Accr-Chr2 46803035 46812933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01513 1 1233 C2H2 Transcription Factor Family AT3G18290 66.561 0.0 1686
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01513 K16276 - gmx:100801725 2072.74