Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01504 ATGGATAATCATCCTATTCCTTCTTTGCTTAAATCCATAGTCACCATCACCTCCTCCTTCTTCTTCTTCTTCTCAATAGCTTTGCCACAATCCTATGCTCAAGAAAATAATGCATACTCTGCGTGTAGCCAACCATATAGTTGTGGATCTGTCACAAACATTTCCTACCCTTTCTGGGGACAAAACAGAGAGAGCTTTTGTGGTAAAAGTGGCTTCCAACTCATGTGCCAGAATCATCTAAACACTACAATTCAAGTTGGCTCACAAACTTTCAACGTACTGCAGATTGACCAAACTGGTTTTACCATGCGACTTGCTCTACCAGAATCATCATATAATCTTTGTCCTCCTAATATTTCCAATACTTCTCTGAGTGGCAGTCCCTTCAGTTTCCTCCCCAATACAGTTCAGAACATCACTGTGTTCTACGACTGTCCCCTCCAGATTTCTGGAATTAACAGCTTCAAGTGCCAGAACAATTCTAGTAAACAAGCTTTCTATGTGAATGGAGCCCAGTTGCAGCGAGCTTCAGGATTTGACAGATGTGGGTATCGTGTTCAAGTGCCAGTGTCAGTGGATATTCCCTTGGATTCGCTCAAGAATGCTCTGGATAAAGGGTTTGATGTGAAGTATGATGATCCTGACTGTGAAAACTGCAAGGCTTCTGGAGGAATATGTGGAACAAATCAGAATAATAGCTCTACGTTTTCTTGTTATTGCCATGATGGAACAACCAATTCAGACTGTTCTGCTAGCAGAACTAAAAACAGTAAAAGAAACAAAGTAATGAAGCTAGCTTTAGGTTTTTTGGCTACTGGAGTTGGATTGCCTCTCTTAGCAGTCACCATATGCAAAAACAAAGAAAAAATATGGCGGTTCATAAAAAGGAAAATTGGCAACAAGAAGGAGGATAGAAAAATTGAAACCTTCCTTCAAAGTCAGGGGCCTCTGGCTCTGGAAAGATACAGCTTCTCAGATTTGAAGAAAATGACAGACTCGTTCAAGGTTAAGCTTGGAGAAGGAGGCTATGGTGTTGTTTACAAAGGCAAGCTTCTTGATGGTTGCGAAGTGGCCGTAAAACTCTTGCACGAAGCGAATGAGGACAGCGAAGAATTCATCAATGAGGTTGCCAGCATAAGCAAAACCTCCCATGTTAATGTTGTCACTCTTCTTGGTTTTTGCATAGAAGGACGTAGAAGAGCTCTGGTCTATGAATTCATGTCCAATGGGTCTCTTGAAAAGTTCATTTCCAAGAAGAAGCCAGGTGATGAAAGTGTTGCAACGCTGAGCTGGGATACTTTATATCAGATTGCCAAAGGGACAGCTCGGGGACTAGACTACCTCCACAAGGGATGCAACACTCGAATCTTGCATTTCGATATAAAGCCACATAACATCCTTCTCGATGAGAAGTATCACCCGAAGATATCAGATTTCGGGCTGGCTAAGCTCAACACAAAGGAAGAGAGCATCATTTCGATATCAAATGCAAGGGGGACAATCGGGTACGTGGCCCCGGAAGTGTGGAACAAAAGCATTGGAGGAGTTTCACATAAGTCTGATGTTTATAGCTATGGAATGATGTTGCTGGAAATGGTCGGAGGACAGAAGAGCACTAACATAGGATCCGAAGGAAGCAGCGGGTCGGGAAGCGAGCTGTATTTCCCTCCATTGATGATGTACAAGAAGCTTGAAGCGGGAAGTGATGACGTGGGAGCGAGAGGGGTGACGAGTGATGAGGAGAATGAGATAGCGAAGAAGATGACAATGGTGGGACTGTGGTGTATACAGACAATTCCTGCTCAGAGACCAACCATGAGCAGAGTGATGGAAATGTTGGAAGCAAGTGTGGATTCTTTGGAAATTCCTCCAAAGCCTTTTATGTCTTCTCCTTCGACATCACCCTCTGAATTTTCCTTTATATTGACTTCATTTCAGAGTACTCTTTGA 1950 0.4297 MDNHPIPSLLKSIVTITSSFFFFFSIALPQSYAQENNAYSACSQPYSCGSVTNISYPFWGQNRESFCGKSGFQLMCQNHLNTTIQVGSQTFNVLQIDQTGFTMRLALPESSYNLCPPNISNTSLSGSPFSFLPNTVQNITVFYDCPLQISGINSFKCQNNSSKQAFYVNGAQLQRASGFDRCGYRVQVPVSVDIPLDSLKNALDKGFDVKYDDPDCENCKASGGICGTNQNNSSTFSCYCHDGTTNSDCSASRTKNSKRNKVMKLALGFLATGVGLPLLAVTICKNKEKIWRFIKRKIGNKKEDRKIETFLQSQGPLALERYSFSDLKKMTDSFKVKLGEGGYGVVYKGKLLDGCEVAVKLLHEANEDSEEFINEVASISKTSHVNVVTLLGFCIEGRRRALVYEFMSNGSLEKFISKKKPGDESVATLSWDTLYQIAKGTARGLDYLHKGCNTRILHFDIKPHNILLDEKYHPKISDFGLAKLNTKEESIISISNARGTIGYVAPEVWNKSIGGVSHKSDVYSYGMMLLEMVGGQKSTNIGSEGSSGSGSELYFPPLMMYKKLEAGSDDVGARGVTSDEENEIAKKMTMVGLWCIQTIPAQRPTMSRVMEMLEASVDSLEIPPKPFMSSPSTSPSEFSFILTSFQSTL 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01504 649 SUPERFAMILY Protein kinase-like (PK-like) 310 614 IPR011009 -
Accr2g01504 649 FunFam PR5-like receptor kinase 407 625 - -
Accr2g01504 649 Gene3D Transferase(Phosphotransferase) domain 1 407 622 - -
Accr2g01504 649 FunFam serine/threonine-protein kinase PBS1-like 300 406 - -
Accr2g01504 649 Pfam Wall-associated receptor kinase C-terminal 157 243 IPR032872 -
Accr2g01504 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Accr2g01504 649 ProSitePatterns Protein kinases ATP-binding region signature. 338 360 IPR017441 GO:0005524
Accr2g01504 649 ProSiteProfiles Protein kinase domain profile. 332 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01504 649 Pfam Protein kinase domain 335 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01504 649 Gene3D Phosphorylase Kinase; domain 1 294 406 - -
Accr2g01504 649 SMART serkin_6 332 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01504 649 Pfam Wall-associated receptor kinase galacturonan-binding 42 106 IPR025287 GO:0030247
Accr2g01504 649 PANTHER RUST RESISTANCE KINASE LR10-RELATED 295 630 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01504 Accr-Chr2 46667961 46670129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01504 26 639 Receptor kinase-like Gene Family AT5G38260 41.066 7.64e-146 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr2g01504 Pkinase 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01504 - - vra:106766588 757.288