Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01472 ATGTCAAAACCCTTGTGTTTCTTCATTATTACTGCTCTTTCCTTCTTGTGCCTAAGGCACAGTGTTGCCGTAAATTCTTCTTCATGTTTCCCTTCTGCTGCTGGTTGCGGCGGAGTTTCCATTCACTATCCTTTCTGGGTGAAAAGCGATTCCGGCCAAGAATACTGTGGTTACCCTGGTTTTGGTCTCAAATGCTCCGATCATGGTCCACCCATTATCTCTCTTCCAAGCGACACATACTATGTTACAGAAATAAACTACCATACTTATACACTAACCCTTCTGGACATGGATGTGGTGAACCAGTCCTGCCCCAGAGCACGCCATAACGTTAGCTTAGGAAGCCTCCCACTGAGTGTTAACTATGACTTGAATGTGAACCTGAGTTTCTACTTCAATTGCAGTGTATCTAATGATTATGCCGATCTTCCTCCCAACCAAATATCGTGCTTGAAAAATGAGGGGTCGAAGAAGTCATATGTGGTTGAGAGTCCGGGATTGAGTGATACATATGGGTTGAATATAGATTGTGAGGAGAAGGTGGTCGTGGTGGTGAAGAAAAAAGAGATAAGAAGTGATGAATTGGTAAGTGGGTTTGGTGAAGCTATGAACGAGGGCTTTGTGCTTGATTGGAGGAGAGCGACGGATTGCGTTAATTGTGAGGATTCCGGAGGATTTTGTGGCTACAATCAAACCAATCATCAACTGTGCTTTTGCACTGATGGAAGTATTGCTACCAAAAGCTGCAGAAAAGCTGGAAGAGGGAGGATTGCAATAAAAAATAAAGTCATTGTAGGTGTTGTAAGTGCTGTAGCCGTTAGTGGAGCAATTGGATTGCTGCTTTTATCAACTAATAATTGTTATTGCAATATCAAATCATGGAGGCGAAGAATAGGAGTATGCGTGACATCTGAGGTTGACCAAAATATTGAAGCTTTTATTAGAAATCACGGTGCTCTTGCTCTCACAAGATATAAATTTGCAGATGTCAAGAAAATGACCAACTCTTTCAAAAAAAAAAATTGGGACAAGGTGGTTCGTTATGGTTCTGTATACAAAGGAAAACTACTTGATGGCCGCCCTGCTGCTATAAAGTTATTGAAGGCAACGAAAGAGGATGGGGAAGACTTTATCAATGAGGTTGCCAGCATTAGTAGGACTTCCCATGTAAATGTTGTTACCCTTCTTGGGTTTTGTTTTGAAGGTAAACATAAGGCTCTCATTTATGAATTTATGCCTAATGGATCCCTTGACAAGTTCCTTCACAACAACACAAATAAAAAGAGTCAACGCTTGACTTGGGAAAAGTTATACCAAATTGCAATTGGAATAGCTCGAGGACTTGAGTATTTGCATAGAGGATGCAACACTCAAATTCTACATTTTGATATAAAGCCCCATAACATCCTTTTAGATGAAAGCTTTTGCCTCAGGATCTCAGATTTTGGTCTTGCTAAACTATGCCCCAAAAAAGAAAGTTTCATTTCAATTTCAGAAGCAAGAGGAACGATAGGATATCTTGCTCCAGAAGTTTGGAATAGAAACATAGGTGGAGTTTCTCAGAAATCTGATGTTTATAGCTATGGGATGATGCTGTTAGATATGGTTGGTGGGAGAAAGAACATGACTGTTGAAACCAATTGTTCAACTGATAAATATTTTCCAGATTATATTTATGATCAACTTGAGCAAGATGGAAGTTTGGGATGTAATGGGGCTAATAACACAGGGGAAAATGATATTGCCAAGAGAATGACAATTGTGGCTTTGTGGTGTATCCAAACATTCCCAAGCCACAGACCTACAATGAGTAGGGTGATTGAAATGTTTGAAAGAAGACTCGACTTGTTGGAAATACCACCAAAACCTGTTATATCTTCCCCTCCAAGATTAGAACTAGAATCTTCCACCACTACTAATACCACAACATAG 1932 0.4006 MSKPLCFFIITALSFLCLRHSVAVNSSSCFPSAAGCGGVSIHYPFWVKSDSGQEYCGYPGFGLKCSDHGPPIISLPSDTYYVTEINYHTYTLTLLDMDVVNQSCPRARHNVSLGSLPLSVNYDLNVNLSFYFNCSVSNDYADLPPNQISCLKNEGSKKSYVVESPGLSDTYGLNIDCEEKVVVVVKKKEIRSDELVSGFGEAMNEGFVLDWRRATDCVNCEDSGGFCGYNQTNHQLCFCTDGSIATKSCRKAGRGRIAIKNKVIVGVVSAVAVSGAIGLLLLSTNNCYCNIKSWRRRIGVCVTSEVDQNIEAFIRNHGALALTRYKFADVKKMTNSFKKKNWDKVVRYGSVYKGKLLDGRPAAIKLLKATKEDGEDFINEVASISRTSHVNVVTLLGFCFEGKHKALIYEFMPNGSLDKFLHNNTNKKSQRLTWEKLYQIAIGIARGLEYLHRGCNTQILHFDIKPHNILLDESFCLRISDFGLAKLCPKKESFISISEARGTIGYLAPEVWNRNIGGVSQKSDVYSYGMMLLDMVGGRKNMTVETNCSTDKYFPDYIYDQLEQDGSLGCNGANNTGENDIAKRMTIVALWCIQTFPSHRPTMSRVIEMFERRLDLLEIPPKPVISSPPRLELESSTTTNTTT 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01472 643 PANTHER RUST RESISTANCE KINASE LR10-RELATED 307 630 IPR045874 GO:0004672
Accr2g01472 643 Pfam Wall-associated receptor kinase galacturonan-binding 35 96 IPR025287 GO:0030247
Accr2g01472 643 Gene3D Phosphorylase Kinase; domain 1 301 411 - -
Accr2g01472 643 ProSiteProfiles Protein kinase domain profile. 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01472 643 Pfam Wall-associated receptor kinase C-terminal 150 242 IPR032872 -
Accr2g01472 643 SUPERFAMILY Protein kinase-like (PK-like) 328 611 IPR011009 -
Accr2g01472 643 Gene3D Transferase(Phosphotransferase) domain 1 412 617 - -
Accr2g01472 643 Pfam Protein tyrosine and serine/threonine kinase 348 609 IPR001245 GO:0004672|GO:0006468
Accr2g01472 643 SMART serkin_6 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01472 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 459 471 IPR008271 GO:0004672|GO:0006468
Accr2g01472 643 FunFam PR5-like receptor kinase 412 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01472 Accr-Chr2 45832562 45836889 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01472 21 641 Receptor kinase-like Gene Family AT5G38260 39.560 2.19e-133 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Accr2g01472 PK_Tyr_Ser-Thr 2.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01472 - - gmx:100796618 633.639