Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01450 ATGGATATTGAGGAGGACATCCGTTCTCTACAGCTTGATTCAGCAGAAGATAATGGTGTTGTTAATCCGGAGGAGGCAAAGCCAGAAGAGGTTGAGAATTCTGCTAAGATGGATGAAGGTCTGCAGCAGGAAGCTAAGGCACAGCCTGTCCAGGCTGAGCCTAAAGATAAGGAAATTCCTCAAGCAGAAGATCAAGAGGATGTGACAGATAAGAGAAGACACTTGAATGTTGTGTTCATCGGTCATGTTGATGCTGGCAAGTCCACGACGGGAGGCCAGATTCTTTTCCTAAGTGGCCAGGTTGATGAACGTACTATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGTAGAGAAAGTTGGTATATGGCTTATATAATGGACACTAATGAAGAGGAAAGGGTAAAGGGAAAAACAGTTGAAGTTGGAAGAGCGCATTTTGAGACAGAAAAATCAAGGTTTACAATTTTGGATGCTCCTGGTCACAAAAGTTATGTCCCCAACATGATCAGTGGTGCAGCTCAAGCTGATATTGGAGTTTTGGTTATTTCTGCTCGAAAGGGAGAATTTGAAACTGGTTATGAAAGAGGTGGACAAACCCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGTCTAAGCTTATTGTTGTTGTTAATAAAATGGACGATCCTACAGTGAAGTGGTCAAAACAAAGGTATGATGAAATTGAGTCGAAGATGATTCCTTTTCTTAAGTCATCGGGCTACAATGTGAAAAAAGATGTCCTGTTTTTACCATTATCTGGGCTGACCGGTGCAAACATGAAAACTAGAGTGGATAAAAGCATCTGTCCTTGGTGGGATGGTCCCTGCTTATTTGAAGCCCTTGATGGTGTTGAAATTCCACCTCGAGACCCCAATGCCCCTTTCAGGATGCCTATTCTTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGAAAAGTGGAATCTGGTACTATACGTGAGGGGGACTCCTTGTTGGTTATGCCAAATAAGGATCAAGTTAAAGTTGTTGCTGTATTCATTGATGAAAATAGGGTCAAACGTGCTGGACCTGGTGAGAATTTACGAGTTAGAATATCTGGTGTTGAAGAAGAAGACATATTAGGCGGGTTCATGCTTTCTAGTGTTGAAAATCCAATACCTGCTGTTACTGAGTTTGTGGCTCAGCTGCAGATCCTCGAATTGCTTGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTTTGCACATCCATTGTGTTGTCGAAGAATGTGAGATTGTTGACCTCCTACAGCAAATTGATCCAAAGGCAAAGAAACCTATGAAAAAGAAACCTCTCTTTGTGAAGAATGGTGCTGTTGTTGTCTGCCGAGTTCAGGTTAATAATACGATATGTGTTGAGAAATTTGCTCATTTTCCCCAACTTGGACGGTTTACTCTACGCACAGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGTTTTTAA 1497 0.4162 MDIEEDIRSLQLDSAEDNGVVNPEEAKPEEVENSAKMDEGLQQEAKAQPVQAEPKDKEIPQAEDQEDVTDKRRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKSRFTILDAPGHKSYVPNMISGAAQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVKWSKQRYDEIESKMIPFLKSSGYNVKKDVLFLPLSGLTGANMKTRVDKSICPWWDGPCLFEALDGVEIPPRDPNAPFRMPILDKFKDMGTVVMGKVESGTIREGDSLLVMPNKDQVKVVAVFIDENRVKRAGPGENLRVRISGVEEEDILGGFMLSSVENPIPAVTEFVAQLQILELLDNAIFTAGYKAVLHIHCVVEECEIVDLLQQIDPKAKKPMKKKPLFVKNGAVVVCRVQVNNTICVEKFAHFPQLGRFTLRTEGKTVAVGKVTGF 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01450 498 CDD eRF3_II 303 384 - -
Accr2g01450 498 Gene3D Translation factors 391 498 - -
Accr2g01450 498 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 51 296 - -
Accr2g01450 498 CDD EF1_alpha 76 297 - -
Accr2g01450 498 Gene3D Translation factors 301 386 - -
Accr2g01450 498 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 307 IPR027417 -
Accr2g01450 498 Pfam Elongation factor Tu GTP binding domain 73 276 IPR000795 GO:0003924|GO:0005525
Accr2g01450 498 SUPERFAMILY Translation proteins 295 388 IPR009000 -
Accr2g01450 498 PRINTS Yeast eukaryotic release factor signature 178 185 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Accr2g01450 498 PRINTS Yeast eukaryotic release factor signature 213 220 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Accr2g01450 498 PRINTS Yeast eukaryotic release factor signature 299 310 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Accr2g01450 498 CDD eRF3_C_III 390 496 - -
Accr2g01450 498 PANTHER TRANSLATION FACTOR 64 496 - -
Accr2g01450 498 Pfam Elongation factor Tu domain 2 316 382 IPR004161 GO:0005525
Accr2g01450 498 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 300 386 - -
Accr2g01450 498 Pfam Elongation factor Tu C-terminal domain 389 496 IPR004160 -
Accr2g01450 498 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 392 497 IPR009001 -
Accr2g01450 498 PRINTS GTP-binding elongation factor signature 215 224 IPR000795 GO:0003924|GO:0005525
Accr2g01450 498 PRINTS GTP-binding elongation factor signature 76 89 IPR000795 GO:0003924|GO:0005525
Accr2g01450 498 PRINTS GTP-binding elongation factor signature 171 182 IPR000795 GO:0003924|GO:0005525
Accr2g01450 498 PRINTS GTP-binding elongation factor signature 155 165 IPR000795 GO:0003924|GO:0005525
Accr2g01450 498 MobiDBLite consensus disorder prediction 1 70 - -
Accr2g01450 498 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 128 143 IPR031157 -
Accr2g01450 498 FunFam Putative translation elongation/initiation factor family protein 390 498 - -
Accr2g01450 498 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 72 301 IPR000795 GO:0003924|GO:0005525
Accr2g01450 498 MobiDBLite consensus disorder prediction 20 39 - -
Accr2g01450 498 MobiDBLite consensus disorder prediction 50 70 - -
Accr2g01450 498 Gene3D - 52 295 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01450 Accr-Chr2 45340140 45358067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01450 74 493 Eukaryotic Initiation Factors Gene Family AT5G60390 38.298 7.91e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01450 K03267 - gmx:100793653 863.988