Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01449 ATGGATATTGAGGAGGACATCCGTTCTCTACAGCTTGATTCAGCAGAAGATAATGGTGTTGTTAATCCGGAGGAGGCAAAGCCAGAAGAGGTTGAGAATTCTGCTAAGATGGATGAAGTTTCAGGTCTGCAGCAGGAAGCTAAGGCACAGCCTGTCCAGGCTGAGCCTAAAGATAAGGAAATTCCTCAAGCAGAAGATCAAGAGGATGTGACAGATAAGAGAAGACACTTGAATGTTGTGTTCATCGGTCATGTTGATGCTGGCAAGTCCACGACGGGAGGCCAGATTCTTTTCCTAAGTGGCCAGGTTGATGAACGTACTATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGTAGAGAAAGTTGGTATATGGCTTATATAATGGACACTAATGAAGAGGAAAGGGTAAAGGGAAAAACAGTTGAAGTTGGAAGAGCGCATTTTGAGACAGAAAAATCAAGGTTTACAATTTTGGATGCTCCTGGTCACAAAAGTTATGTCCCCAACATGATCAGTGGTGCAGCTCAAGCTGATATTGGAGTTTTGGTTATTTCTGCTCGAAAGGGAGAATTTGAAACTGGTTATGAAAGAGGTGGACAAACCCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGTCTAAGCTTATTGTTGTTGTTAATAAAATGGACGATCCTACAGTGAAGTGGTCAAAACAAAGGTATGATGAAATTGAGTCGAAGATGATTCCTTTTCTTAAGTCATCGGGCTACAATGTGAAAAAAGATGTCCTGTTTTTACCATTATCTGGGCTGACCGGTGCAAACATGAAAACTAGAGTGGATAAAAGCATCTGTCCTTGGTGGGATGGTCCCTGCTTATTTGAAGCCCTTGATGGTGTTGAAATTCCACCTCGAGACCCCAATGCCCCTTTCAGGATGCCTATTCTTGACAAATTCAAAGACATGGGAACTGTTGTTATGGGAAAAGTGGAATCTGGTACTATACGTGAGGGGGACTCCTTGTTGGTTATGCCAAATAAGGATCAAGTTAAAGTTGTTGCTGTATTCATTGATGAAAATAGGGTCAAACGTGCTGGACCTGGTGAGAATTTACGAGTTAGAATATCTGGTGTTGAAGAAGAAGACATATTAGGCGGGTTCATGCTTTCTAGTGTTGAAAATCCAATACCTGCTGTTACTGAGTTTGTGGCTCAGCTGCAGATCCTCGAATTGCTTGACAATGCTATTTTTACTGCTGGGTACAAGGCTGTTTTGCACATCCATTGTGTTGTCGAAGAATGTGAGATTGTTGACCTCCTACAGCAAATTGATCCAAAGGCAAAGAAACCTATGAAAAAGAAACCTCTCTTTGTGAAGAATGGTGCTGTTGTTGTCTGCCGAGTTCAGGTTAATAATACGATATGTGTTGAGAAATTTGCTCATTTTCCCCAACTTGGACGGTTTACTCTACGCACAGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGTTTTTAA 1503 0.4158 MDIEEDIRSLQLDSAEDNGVVNPEEAKPEEVENSAKMDEVSGLQQEAKAQPVQAEPKDKEIPQAEDQEDVTDKRRHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKSRFTILDAPGHKSYVPNMISGAAQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVKWSKQRYDEIESKMIPFLKSSGYNVKKDVLFLPLSGLTGANMKTRVDKSICPWWDGPCLFEALDGVEIPPRDPNAPFRMPILDKFKDMGTVVMGKVESGTIREGDSLLVMPNKDQVKVVAVFIDENRVKRAGPGENLRVRISGVEEEDILGGFMLSSVENPIPAVTEFVAQLQILELLDNAIFTAGYKAVLHIHCVVEECEIVDLLQQIDPKAKKPMKKKPLFVKNGAVVVCRVQVNNTICVEKFAHFPQLGRFTLRTEGKTVAVGKVTGF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01449 500 SUPERFAMILY Translation proteins 297 390 IPR009000 -
Accr2g01449 500 PRINTS Yeast eukaryotic release factor signature 215 222 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Accr2g01449 500 PRINTS Yeast eukaryotic release factor signature 301 312 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Accr2g01449 500 PRINTS Yeast eukaryotic release factor signature 180 187 IPR003285 GO:0000288|GO:0003747|GO:0005525|GO:0006415
Accr2g01449 500 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 302 388 - -
Accr2g01449 500 Pfam Elongation factor Tu C-terminal domain 391 498 IPR004160 -
Accr2g01449 500 MobiDBLite consensus disorder prediction 1 71 - -
Accr2g01449 500 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 309 IPR027417 -
Accr2g01449 500 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 130 145 IPR031157 -
Accr2g01449 500 Gene3D Translation factors 303 388 - -
Accr2g01449 500 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 74 303 IPR000795 GO:0003924|GO:0005525
Accr2g01449 500 CDD eRF3_II 305 386 - -
Accr2g01449 500 Pfam Elongation factor Tu GTP binding domain 75 278 IPR000795 GO:0003924|GO:0005525
Accr2g01449 500 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 394 499 IPR009001 -
Accr2g01449 500 PRINTS GTP-binding elongation factor signature 173 184 IPR000795 GO:0003924|GO:0005525
Accr2g01449 500 PRINTS GTP-binding elongation factor signature 217 226 IPR000795 GO:0003924|GO:0005525
Accr2g01449 500 PRINTS GTP-binding elongation factor signature 157 167 IPR000795 GO:0003924|GO:0005525
Accr2g01449 500 PRINTS GTP-binding elongation factor signature 78 91 IPR000795 GO:0003924|GO:0005525
Accr2g01449 500 FunFam Putative translation elongation/initiation factor family protein 392 500 - -
Accr2g01449 500 CDD EF1_alpha 78 299 - -
Accr2g01449 500 Pfam Elongation factor Tu domain 2 318 384 IPR004161 GO:0005525
Accr2g01449 500 CDD eRF3_C_III 392 498 - -
Accr2g01449 500 Gene3D Translation factors 393 500 - -
Accr2g01449 500 MobiDBLite consensus disorder prediction 20 36 - -
Accr2g01449 500 MobiDBLite consensus disorder prediction 52 71 - -
Accr2g01449 500 Gene3D - 54 297 IPR027417 -
Accr2g01449 500 PANTHER TRANSLATION FACTOR 66 498 - -
Accr2g01449 500 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 53 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01449 Accr-Chr2 45340140 45358067 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01449 76 495 Eukaryotic Initiation Factors Gene Family AT5G60390 38.298 8.96e-97 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01449 K03267 - gmx:100793653 861.292