Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01443 ATGGCTCCTCGTGCCGACGAATACGACCAAGATGAGCTCTCCTCCAGCGAAGACGACGATGGCTTCAAGGAGGACATGGAATCCCTCAGACAAGCCTGCAGGATTGCCGAGATCAACCCCGATAATTTTAAACCCACTTCTACCGTCACTCCCGACGATGAGAATGCAGATGCTGTGCTTCCGAAAGCACCTGACCCGCTCTTGGGCCCCGGAGATGCTCTCGTCCCCGTGTCAGACTCGGACGATGAGCAGAGTGACCTTCAGTATCTTCAAAGAGTACAAGAGCTTTACCAGACTTCGTCTCTCAAGCCATTGAAAGTTCTTCCGGCGCTTTCTTTGTCTGATGATGATGAAGATGATACGGAACTCCTCCGGGTCATTATGAATCGCTTTGGCTCTTATGAAAAAGGTCATGATGAAGATAATGTGGATAAAATGGCAGAGGGAGCTCATAGCTCAGGTCTGTGCTCTGAGGTTGAATTTGATAACAGCGTGGCATCTAAGGGATTAGATCCCGGGGAGGCCTGCAAGTCATCCAAGTTACTGGAAAAAAGACCAAAATTTCCTTTCTCCGCTCAGGTTTTCATTGATGCAATAAAAAAGAATAGATCTTTCCAGAGGTTACTTCGAAGTAAGTTGATTCAGATGGAAACGAAAATTCAAGAAAACAGACAGTTAATGGAAAGAGTTAAACTTCTTAGAGATTTTCAGGTTTCATGCATGAGAAGAACGGGGAAAGCTATATCACTGAAAAAGGATCCCCGTGTCCTATTAATATCAACAAGAAAGTCTCCTGCTTCAAGTAACACGAAGATTAATGATAAAAAGGTATCTCCAATGTGTTATGGCCCAGCTGAGAATGCTCATGTTGCTAAATATAAGATGGTGTTAGAACGATCTTCATTTTCTTTGGATCGGAAAAAGTGGTCTAATGTTGAGAGGGAGAATCTTGCTAAGGGAATAAAGCAACAATTTCAAGAGAAGGTGCTTCAAATGTCAATAAATCAGGACAGTTCAGAGTGGTCACGTGGACATGTAAAGAACTTTGATACCATATTGGCATCTATTAAAGATCTTGAGATTACGCCTGAGAACATTAGAATGTTTCTGCCTGAATTCAATTGGGATCAGCTGGCTTCAAAGTATGTTGTTGGTCGTACTGGTGCAGAATGCGAAGCAAGGTGGTTAAATTGTGAAGATCCCTTGATCAATCATAGCACATGGACCTGTGAGGAGGACAAGTTGCTGTTGCACATAGTCCAAGAGATTGGCAATAGGAATTGGTTTAAAATTGCTGAATCACTAAGCACAAATAGGACTCCATTTCAATGCTTGGCACGGTACCAAAGGAGTTTAAATCCTTCCGTGCTAAATAGTGAATGGACTGAGGACGAAGATGATCAACTTAGGCGTGCTGTTGCACATTTTGGTGTGAGCAATTGGCAGTCTGTAGCATCCATATTAGAACGAAGGACTGGAACTCAATGCTCTAATAGATGGAAGAAGTCTCTCTGCCCTGATAAGAAAGGGAGCTTTACTGTAGAAGAAAATGAGCGCTTAACAGTGGCCGTCCGTCTCTTTGGACGGAAATGGAATCAGATAGCTAAATTCATTCCTGGCCGAACCCAATCTCAGTGTAGAGACAGATATGTCAATAGTTTGGATCCCTCTTTGAAATGGGGTGGTTGGACTGAGGAAGAAGATTCAAGATTGAAAGAAGCAATTGCCAAACATGGATTCTGCTGGTCAAAGGTTGCTGCAGATGTGCCTCCACGAACTGACAGTCAATGCAGGAAGAGATGGCGGGTACTATTTCCTGACCAAGTTCCCATGCTTCAAGCAGCTAGAAAGATGCAAAAGTCAGCTCTAAGCAGTAACTTTGTTGATCGAGAGTCTGAACGTCCTTGCCTTTCTCTAAACGATTTTCTTCCCTTGGCGATATTAGATCAACCATCTGATCCAGATGCCGTGAACCTTCCTCAGAAGCGGAAGCTGAAGAGTCAGTCAAGCAATACTTCTAAGAACAAGAGGCCTCAAAAACGCAGAAAGAAGGCTCAAAGTTGTCTTAAGAACAGGAGGCCTCTAAAAGGCACAATAATGTCTCAAAGTTGTCTCAGGAAAGTACAAGCTGACAAGGTTGAGCCTTTTAGTGGACATGGTATCCACAAGCCAAAGATTACTGAACCTCATTTGGAGGACAACTCTGTTGAAGCAGCACATGATCATTCCCCGCTGGATTTGGTTGTGGCAACCACGAATGGCCAAGAGGATTTAGGTGGGAATAACAATATCGAGAAGCTAATTGGGTCAAATCAAATGCGGAATGGTTTTAATGAATTACATGAAGAGAGCCATACTTGTATAACATCTTGTGAGAATCCAAAAGCAGGGAGACCAGGTGGGCATTGTGAGAAAATCTCTTCTATGGACTCATTGAAACACCAAACTGGAAGAAAGTCAACGCTATGTGCAAGTATATCTGATGGTGCAGCTGTAGGTAGTAAGGTTGCCAGAAATACTACTTCAGTGAAGGAAAGAAAGGAGAAAGGGAAATTTGACAGAATGGTTAGAAGTGTTCAAACAGCAGAGGACCACATGGTTAAGAATAAAATGCCAAAACCTGTAAGCCTATCTTCTATGCCGATTTTAGAAAGTCAGGATGAAGATAATGTAATTCTTGCTAGAGATTTATGCAATCTATCAAACAAACGGTTTAAAAATACCAATAAAATGACTCAGGCTGCTTCTTCCATGAAAAAAACACGGAGATCTCTTCAAGCTTCCAAACAAACTCATGATTGCCTGTCTTCTAGTTTGAAAAAGGGATGTGAATTGCTTTCTGAAGAAGTGCACAACGGTCATGACAGAAACCAAGAAATGTTGGTCATGCAAGATAAGAATTTAGATAAAGATTGTATTGATGTTACACCTGGGGCTCTGCTGGTTCAGAATCATTTTTGCAATTTGAAGAACATGTCAACCGCTAAAGCTGATGACAATGGGAAGGCAGTGTCAGGGCCAGTTGATGAGCAGGCTAAGTTTTTGGATGGTGCGACAGAACCCAAAAACATCATTGTTGGAAAGGATGAAGCTACTGACGTCACCCTTGCTTCCCTACTGAAAAAGAAGAAAAGAAAGGGCAAGGCAATGGCAGAGCCAGTTGATGAGCAGGCTATGGTTTCGAATGGTTTGACAGAAACCAAAGGCATGAGTGTTGGAGATGATGGGTCTCTTGATGTTACTCTTGCTTCCTTGCTGAAAAAGAAAGGAAGGAGACAGGGTAGAGCAGCTAAATGTGGCAAACGTCCTTCTCTTGATGTGACTAAATGA 3330 0.427 MAPRADEYDQDELSSSEDDDGFKEDMESLRQACRIAEINPDNFKPTSTVTPDDENADAVLPKAPDPLLGPGDALVPVSDSDDEQSDLQYLQRVQELYQTSSLKPLKVLPALSLSDDDEDDTELLRVIMNRFGSYEKGHDEDNVDKMAEGAHSSGLCSEVEFDNSVASKGLDPGEACKSSKLLEKRPKFPFSAQVFIDAIKKNRSFQRLLRSKLIQMETKIQENRQLMERVKLLRDFQVSCMRRTGKAISLKKDPRVLLISTRKSPASSNTKINDKKVSPMCYGPAENAHVAKYKMVLERSSFSLDRKKWSNVERENLAKGIKQQFQEKVLQMSINQDSSEWSRGHVKNFDTILASIKDLEITPENIRMFLPEFNWDQLASKYVVGRTGAECEARWLNCEDPLINHSTWTCEEDKLLLHIVQEIGNRNWFKIAESLSTNRTPFQCLARYQRSLNPSVLNSEWTEDEDDQLRRAVAHFGVSNWQSVASILERRTGTQCSNRWKKSLCPDKKGSFTVEENERLTVAVRLFGRKWNQIAKFIPGRTQSQCRDRYVNSLDPSLKWGGWTEEEDSRLKEAIAKHGFCWSKVAADVPPRTDSQCRKRWRVLFPDQVPMLQAARKMQKSALSSNFVDRESERPCLSLNDFLPLAILDQPSDPDAVNLPQKRKLKSQSSNTSKNKRPQKRRKKAQSCLKNRRPLKGTIMSQSCLRKVQADKVEPFSGHGIHKPKITEPHLEDNSVEAAHDHSPLDLVVATTNGQEDLGGNNNIEKLIGSNQMRNGFNELHEESHTCITSCENPKAGRPGGHCEKISSMDSLKHQTGRKSTLCASISDGAAVGSKVARNTTSVKERKEKGKFDRMVRSVQTAEDHMVKNKMPKPVSLSSMPILESQDEDNVILARDLCNLSNKRFKNTNKMTQAASSMKKTRRSLQASKQTHDCLSSSLKKGCELLSEEVHNGHDRNQEMLVMQDKNLDKDCIDVTPGALLVQNHFCNLKNMSTAKADDNGKAVSGPVDEQAKFLDGATEPKNIIVGKDEATDVTLASLLKKKKRKGKAMAEPVDEQAMVSNGLTETKGMSVGDDGSLDVTLASLLKKKGRRQGRAAKCGKRPSLDVTK 1109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01443 1109 Gene3D - 406 456 - -
Accr2g01443 1109 SUPERFAMILY Homeodomain-like 456 550 IPR009057 -
Accr2g01443 1109 Gene3D - 459 507 - -
Accr2g01443 1109 ProSiteProfiles Myb-like domain profile. 555 605 IPR001005 -
Accr2g01443 1109 MobiDBLite consensus disorder prediction 675 690 - -
Accr2g01443 1109 MobiDBLite consensus disorder prediction 652 693 - -
Accr2g01443 1109 SUPERFAMILY Homeodomain-like 534 608 IPR009057 -
Accr2g01443 1109 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 400 452 IPR017930 -
Accr2g01443 1109 MobiDBLite consensus disorder prediction 1088 1109 - -
Accr2g01443 1109 Gene3D - 508 559 - -
Accr2g01443 1109 Gene3D - 560 607 - -
Accr2g01443 1109 CDD SANT 563 605 IPR001005 -
Accr2g01443 1109 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 509 549 IPR017930 -
Accr2g01443 1109 ProSiteProfiles Myb-like domain profile. 508 554 IPR001005 -
Accr2g01443 1109 ProSiteProfiles Myb-like domain profile. 453 504 IPR001005 -
Accr2g01443 1109 SUPERFAMILY Homeodomain-like 380 449 IPR009057 -
Accr2g01443 1109 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 555 609 IPR017930 -
Accr2g01443 1109 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 453 508 IPR017930 -
Accr2g01443 1109 MobiDBLite consensus disorder prediction 1 80 - -
Accr2g01443 1109 Pfam Myb-like DNA-binding domain 408 469 - -
Accr2g01443 1109 Pfam Myb-like DNA-binding domain 512 571 - -
Accr2g01443 1109 CDD SANT 460 504 IPR001005 -
Accr2g01443 1109 ProSiteProfiles Myb-like domain profile. 400 452 IPR001005 -
Accr2g01443 1109 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 14 1068 - -
Accr2g01443 1109 SMART sant 404 454 IPR001005 -
Accr2g01443 1109 SMART sant 559 607 IPR001005 -
Accr2g01443 1109 SMART sant 457 506 IPR001005 -
Accr2g01443 1109 SMART sant 508 556 IPR001005 -
Accr2g01443 1109 SMART sant 305 401 IPR001005 -
Accr2g01443 1109 CDD SANT 511 554 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01443 Accr-Chr2 45231031 45237904 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01443 188 688 MYB-Related Transcription Factor Family AT3G18100 52.446 3.08e-175 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g01443 Myb_DNA-bind_6 8.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01443 K09422 - gmx:100818474 793.497