Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01439 ATGAGAAGGCCTTCCTCCGAGAAACGATCTTGGTCCAAAGAAGAAGACCAGAGACTCATTGATCACGTTCAAAAACATGGGGAACGTTGCTGGCCTTCACTTCCTCGGGCCACAGGGTTGCGTCGCTGTGGGAAAAGTTGTCGTTTGAGATGGTTAAATTATCTGAAGCCTGATATTAAAAGAGGAGACTTCGGAGAAGATGAAGAGGACTTGATCATCAGGCTTCATGCTCTTCTTGGCAACCGGTGGTCATTGATAGCGGGAAGATTACCAGGAAGAACGGATAACGAGGTGAAGAATTATTGGAACTCTCACATAAGAAAGAAGCTTATTCAGATGGGTCGTCATGATCCCAATAGTAATAATGTTGGTGATCGCTATATTAAAAGATCTACACTTAATAGTAATAATATTGCAAATCAGAAGGATGATCATGAAGCTTCCAATGTAGTCAACAACTTGCATAATAATGTTACTACTCATAAAAATCTTATAGACGACGGCGAAGAAGAAGACGACGACGACAACCATCAAGCATCTGAGTCTTCAACAAGCAAGCCCAAGTTCAACCTCAACGCTTTTCCTGATCTGAATCTTGATCTCACACTCACTACTACTTATCACTCTAATAATAATTAA 639 0.41 MRRPSSEKRSWSKEEDQRLIDHVQKHGERCWPSLPRATGLRRCGKSCRLRWLNYLKPDIKRGDFGEDEEDLIIRLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRKKLIQMGRHDPNSNNVGDRYIKRSTLNSNNIANQKDDHEASNVVNNLHNNVTTHKNLIDDGEEEDDDDNHQASESSTSKPKFNLNAFPDLNLDLTLTTTYHSNNN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01439 212 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Accr2g01439 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Accr2g01439 212 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Accr2g01439 212 FunFam MYB transcription factor 62 121 - -
Accr2g01439 212 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 55 IPR017930 -
Accr2g01439 212 MobiDBLite consensus disorder prediction 165 191 - -
Accr2g01439 212 Gene3D - 8 60 - -
Accr2g01439 212 FunFam MYB-related transcription factor 7 60 - -
Accr2g01439 212 CDD SANT 66 106 IPR001005 -
Accr2g01439 212 SMART sant 7 57 IPR001005 -
Accr2g01439 212 SMART sant 60 108 IPR001005 -
Accr2g01439 212 CDD SANT 10 55 IPR001005 -
Accr2g01439 212 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 6 183 - -
Accr2g01439 212 Gene3D - 62 186 - -
Accr2g01439 212 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Accr2g01439 212 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
Accr2g01439 212 SUPERFAMILY Homeodomain-like 7 102 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01439 Accr-Chr2 45170855 45172846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01439 2 204 MYB Transcription Factor Family AT4G38620 47.642 3.93e-60 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g01439 Myb_DNA-binding 1.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01439 K09422 - csav:115721889 217.624