LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr2g01434	ATGGGTGGTGGAACGACACTGGTGGACGGAATTCGTCGCCTTTTTCAACGTCGACCTTCTTCTGCGATCAAGTCCTCTGATGACGAGGCGAGCCACAATCATAACAATCACAATGCCGATCGTATGGCTAGTAGCAACAATAGCCACAAGTTCGTGAGAGATTTGCGCGCTCAATTAGCCACTCTTCCCATACAGGAGAGAGAGGAAGGCGAGGGGTTCGACGATAGGCTCACGATTGATGATGATTTTGATATCTCTGGCTTGAAGCATATCAAGGTTCCCACACGGGCGTACTTCGAAGCTGCTTCCATGGATCCTACAAAGAAGACATCAGAAACAGAGTTCTTCACCGAGTATGGAGAGGCAAGTCGATATCAGGTCCAAGAAGTTATTGGAAAAGGAAGTTATGGTGTCGTGGGTTCTGCAATTGATACTCATACAGGAGAAAAGGTTGCAATTAAGAAAATTAATGATGTTTTTGAGCATGTCTCAGATGCCACACGGATTCTAAGAGAAATTAAACTCCTCCGTTTGCTCCGACACTCTGATATAGTAGAAATCAAGCATATAATGCTTCCTCCTTCACGACGAGAGTTCAAGGATATCTATGTTGTGTTTGAGTTGATGGAATCTGACCTTCATCAAGTAATCAAGGCTAATGATGATCTTACGCCTGAGCACCATCAATTTTTCTTGTACCAACTTCTTCGGGGCCTGAAATATATACATTCTGCTAATGTGTTTCATCGTGATTTAAAGCCCAAGAATATTCTTGCTAATGCTGATTGCAAACTGAAAATATGTGATTTTGGGCTTGCTCGAGTTTCCTTTAATGATGCACCTTCTGCTATATTCTGGACTGACTATGTTGCAACTCGGTGGTATCGTGCGCCAGAATTATGCGGTTCTTTTTTCTCAAAATATACCCCTGGAATTGATATTTGGAGCATCGGATGCATATTTGCAGAAATGCTCTCTGGGAAGCCACTGTTTCCCGGTAAAAATGTGGTGCACCAGTTGGATCTCATGACTGATTTACTTGGTACTCCTCCTGCTGAAACCATTTCGAGGATACGTAATGAGAAGGCTAGAAGGTACCTTGCTAACATGCGGAAAAAGCAACCAGTTCCACTTTCTCAAAAGTTCCCTCGTGCAGATCCATTGGCCCTCCGTCTACTGGAGCGCCTGCTTGCATTTGATCCTAAAGATCGTCCTTCTGCTGAAGAGGCATTAAGTGATCCTTACTTTCGTGGTTTGGCAAATGTTGAGCGTGAACCAGCAGCTCCTCAACCAATTTCAAAACTTGAGTTTGAGTTTGAGAGAAGAAAAGTGACTAAAGATGATGTTAGAGAGTTGATTTATCGAGAGATTCTAGAGTATCATCCTCAAATGCTCCATGAATATCTGCGTGGTGGAGATCAGACCAGTTTCATGTATCCGAGTGGGGTTGATCGGTTCAAGCGACAGTTTGCACATCTTGAGGAGCACTATGGCAAAGGTGAACAAAGCACTCCTTTGCAGAGACAGCATGCCTCCTTGCCTAGAGAACGAGTACAAGTTCCCATGGATGAAGCTGGTCAAAATAATGACTTTGAAAGGCGAAGAGCCGAGTCTGTTGCAACAACTCTTCATAGTCCTGATGGGACTGAAGCTGCACAAAATGGATCAAACCAAGTTGGCTCCCGTAGCCTGTTGAAGAGTGCCAGCATCAGTGCCTCCAAGTGTGTAGGTGACAAACAAAGTAAAGATCCAGAGGAGGAGCCTATTGAAGAGGTGAATGATGAGGAAGTGGATGGGTTGTCAGAGAAGCTTAATGCTCTTCGTGCTTAG	1830	0.4432	MGGGTTLVDGIRRLFQRRPSSAIKSSDDEASHNHNNHNADRMASSNNSHKFVRDLRAQLATLPIQEREEGEGFDDRLTIDDDFDISGLKHIKVPTRAYFEAASMDPTKKTSETEFFTEYGEASRYQVQEVIGKGSYGVVGSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHSDIVEIKHIMLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHSANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPGIDIWSIGCIFAEMLSGKPLFPGKNVVHQLDLMTDLLGTPPAETISRIRNEKARRYLANMRKKQPVPLSQKFPRADPLALRLLERLLAFDPKDRPSAEEALSDPYFRGLANVEREPAAPQPISKLEFEFERRKVTKDDVRELIYREILEYHPQMLHEYLRGGDQTSFMYPSGVDRFKRQFAHLEEHYGKGEQSTPLQRQHASLPRERVQVPMDEAGQNNDFERRRAESVATTLHSPDGTEAAQNGSNQVGSRSLLKSASISASKCVGDKQSKDPEEEPIEEVNDEEVDGLSEKLNALRA	609

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g01434	609	FunFam	Mitogen-activated protein kinase	441	463	-	-
	Accr2g01434	609	FunFam	Mitogen-activated protein kinase	211	440	-	-
	Accr2g01434	609	MobiDBLite	consensus disorder prediction	497	609	-	-
	Accr2g01434	609	MobiDBLite	consensus disorder prediction	542	576	-	-
	Accr2g01434	609	Pfam	Protein kinase domain	125	416	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr2g01434	609	FunFam	Mitogen-activated protein kinase	114	219	-	-
	Accr2g01434	609	ProSitePatterns	Protein kinases ATP-binding region signature.	131	155	IPR017441	GO:0005524
	Accr2g01434	609	Gene3D	Transferase(Phosphotransferase) domain 1	211	440	-	-
	Accr2g01434	609	SUPERFAMILY	Protein kinase-like (PK-like)	121	421	IPR011009	-
	Accr2g01434	609	ProSitePatterns	MAP kinase signature.	160	263	IPR003527	GO:0004707\|GO:0005524\|GO:0006468
	Accr2g01434	609	CDD	STKc_TDY_MAPK	124	462	-	-
	Accr2g01434	609	Gene3D	Phosphorylase Kinase; domain 1	141	463	-	-
	Accr2g01434	609	PANTHER	MITOGEN-ACTIVATED PROTEIN KINASE	118	464	-	-
	Accr2g01434	609	MobiDBLite	consensus disorder prediction	22	36	-	-
	Accr2g01434	609	SMART	serkin_6	125	416	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr2g01434	609	MobiDBLite	consensus disorder prediction	18	46	-	-
	Accr2g01434	609	ProSiteProfiles	Protein kinase domain profile.	125	416	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g01434	Accr-Chr2	44945792	44950707	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr2g01434	1	597	MAP Kinase Gene Family	AT1G73670	69.421	0.0	824

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_MAPK	Accr2g01434		Pkinase	9.1e-68	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g01434	-		-	zju:107434116	904.049