Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01433 ATGGACCCTAACTCGATCCCTCCTCATCCTCCATCCGCTTTCCCGGCTGCAATCTCTCTCTTCCCCGTCAACTATGGTGCTGTTGCTGCCCCAAACACTACCACCGCTGCGGCCGCCGTCGCTCCCGTCGCGAATTCGGCTCCGGCCCCCGCTGCTTCTGATGCAGTTTCCACCCAGCATGCTGCTCCCTCTGAGAACCTCCCTCCGTATTCTGAGATGATTTATGCAGCAATTGAGGCGCTGAAGGAGAAAAATGGGTCTAGTAAGAGGGCTATTGCGAAATACATAGAGCAAGCATATCCTAATCTTCCACCGAATCACCCTACTATGTTGACCTACCACCTTCAGCGCTTAAAGAACAATGGACTCCTTGTTATGGTCAAAAAATCTTATAAACTTCCTAGATCTGACGGTTCTCCGTCTACTGCGCAGAGAGGACGTGGCAGACCACCGAAGCTCAAGCCGCAGCCGCAGGCCCAACCTCTGGCTCAGCCTCAGGTTCTGGCCTCGGCTCAGCCAGAGCAGCAGCAGCCGCCGGAGTCCATGCCCAACGCGTCGCAAAATCTGCAAAATGCTGAGCCTGTTTGGGTTGCCCTAGGGCTCGCTGATGAGCCCACGGAGGTGAAGAAACGAGGCCGAGGACGTCCTCGCAAGAGTGCCGTAGCAGAGGCGGTTGGTGTTCCTGGAACAGCTGCTCGGAGAGGCCGTCCACCGGGAACTGGGAGATCTAGGTTGCCAAAGAGGCCCGGCCGTCCGCCCAAGCCGAAATCTGTGACGGCAATCTCCAATGGGATGAAGCGTCGACCCGGTAGGCCGCCCAAAGGCCAGTCTAAACCCACTGTGATTCCCTTTGCCGCTCCGGCTGCTGCTGCGCAAGGTCCTAATTCACTCCCTGCTCAAGAAGGTGCTGTGCCGGATGCTACTGCGCCAGCTCTCGCTCCTAGGCGTAGAGGACGTCCGAAGAAGTATGGAGTGCAAACTCTCGGAGTTGCTCCTCAAGCTTTTATTGGCCGTGGTCGAGGCCGTGGCCGTGGACGAGGACGAGGGCGCGGTGCCTATCGTAGCTCTACTGGAAGACCTGTTGGCCGGCCTAGGAAGGGAACTACTGTTGATGGTGCTGCACAGAAATCTGCTAATGAAGACTTCAAGAAGAAACTTGAACAGTTTCAATCTAAAATGAAGGAATCTCTTGCTGTGATTAAGTCTCATTTCAACCATGAAAGCCCAGTCACTGCTATTGCGGCAATCCAGGAATTAGAAAATCTGGCAACTATGGACATTAATGCCCCATTAAATGATGATGCGCAGCCAACACAGCAACTTCCTCAGGTGCAGCAAGTGCAGCCACAGCCGCCGCCTCAGCAATCAGAGCAGCCAGAGTTTCAACCACAGCAAATGCCACCACAACGGCTGTACCAACATCAGTTGCCACAGTCTCATGTGTTTCCTCAGGCATTTCAGCCACCTTCAATTTACCAACAGCAAGTGCCTCAGAGTCAGCTTTTTCAACAGCAAATGCAGCATGTACCATTGCAGTCTCAGCCGCCGCAATTGTTTCAGCCGCATGCATGA 1572 0.5445 MDPNSIPPHPPSAFPAAISLFPVNYGAVAAPNTTTAAAAVAPVANSAPAPAASDAVSTQHAAPSENLPPYSEMIYAAIEALKEKNGSSKRAIAKYIEQAYPNLPPNHPTMLTYHLQRLKNNGLLVMVKKSYKLPRSDGSPSTAQRGRGRPPKLKPQPQAQPLAQPQVLASAQPEQQQPPESMPNASQNLQNAEPVWVALGLADEPTEVKKRGRGRPRKSAVAEAVGVPGTAARRGRPPGTGRSRLPKRPGRPPKPKSVTAISNGMKRRPGRPPKGQSKPTVIPFAAPAAAAQGPNSLPAQEGAVPDATAPALAPRRRGRPKKYGVQTLGVAPQAFIGRGRGRGRGRGRGRGAYRSSTGRPVGRPRKGTTVDGAAQKSANEDFKKKLEQFQSKMKESLAVIKSHFNHESPVTAIAAIQELENLATMDINAPLNDDAQPTQQLPQVQQVQPQPPPQQSEQPEFQPQQMPPQRLYQHQLPQSHVFPQAFQPPSIYQQQVPQSQLFQQQMQHVPLQSQPPQLFQPHA 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01433 523 MobiDBLite consensus disorder prediction 206 382 - -
Accr2g01433 523 FunFam Histone H1.2 63 143 - -
Accr2g01433 523 MobiDBLite consensus disorder prediction 429 523 - -
Accr2g01433 523 MobiDBLite consensus disorder prediction 431 445 - -
Accr2g01433 523 SMART AT_hook_2 231 243 IPR017956 GO:0003677
Accr2g01433 523 SMART AT_hook_2 266 278 IPR017956 GO:0003677
Accr2g01433 523 SMART AT_hook_2 314 326 IPR017956 GO:0003677
Accr2g01433 523 SMART AT_hook_2 210 222 IPR017956 GO:0003677
Accr2g01433 523 SMART AT_hook_2 358 370 IPR017956 GO:0003677
Accr2g01433 523 SMART AT_hook_2 144 156 IPR017956 GO:0003677
Accr2g01433 523 CDD H15 68 143 IPR005818 GO:0000786|GO:0003677|GO:0006334
Accr2g01433 523 MobiDBLite consensus disorder prediction 131 187 - -
Accr2g01433 523 PRINTS AT-hook-like domain signature 208 219 IPR017956 GO:0003677
Accr2g01433 523 PRINTS AT-hook-like domain signature 144 154 IPR017956 GO:0003677
Accr2g01433 523 PRINTS AT-hook-like domain signature 312 322 IPR017956 GO:0003677
Accr2g01433 523 SUPERFAMILY "Winged helix" DNA-binding domain 64 140 IPR036390 -
Accr2g01433 523 MobiDBLite consensus disorder prediction 459 523 - -
Accr2g01433 523 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 66 135 IPR005818 GO:0000786|GO:0003677|GO:0006334
Accr2g01433 523 MobiDBLite consensus disorder prediction 159 187 - -
Accr2g01433 523 PANTHER HISTONE H1 45 276 - -
Accr2g01433 523 SMART h15plus2 64 130 IPR005818 GO:0000786|GO:0003677|GO:0006334
Accr2g01433 523 Coils Coil 78 98 - -
Accr2g01433 523 Gene3D - 63 144 IPR036388 -
Accr2g01433 523 Pfam linker histone H1 and H5 family 68 128 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01433 Accr-Chr2 44896627 44900660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01433 73 148 Single Myb Histone (SMH) Gene Family AT1G49950 38.158 5.11e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01433 - - pcin:129310438 641.343