Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01424 ATGGAGCAAATTAGAGAAAAGTTTCTATACAATGGATCCTTCATTCATGGCGCTGGCATCTTGAATCTTCCAACTAGTCAAGAGAGATTGCAGTCTCCTGCAGCTAATAGGCCTGTCCTCTCTTATGAACAAACAGATTTTATGATCATATACATGGATCGGCTAACAGAATTCTTTTTGTTTTTTATAGCTGTTCTCCAATTCATATCAGGAATAACTTCAACAGAATTCACAGTGATTAACAAATGCAACTACACAGTATGGCCAGGCATTTCTTCAGTCGCTGGCAATAATGATAATCCATTATCAACCACAGGTTTTGTTCTTAAAACAGGTGAGTCTAAGATAATCTCTGCGCCCCCTTCTTGGAATGGCCGCTTTTGGGGTCGGACTCAATGCACACAAGACTCCACCGGAAGAAACTTCTCTTGTCTCACCGGCGACTGTGGCTCTGGGAAGCTCGAATGCCAAGGCAGGGTAGGCACACTGCCTGTGACATTGATAGAAATTTCTCTAGGACAATTCCAAGGGCTTGATTTCTATGACGTGAGCTTGATAGATGGATTCAATGTGCCTGTAGCGGTTGTTCCTCGCGGCGGTTGTGGAGGCTGCAAGAGCACATATTGTCTGGCAGATATGATCAGCCTATGCCCTTCAGAACTAAGGGTAATGAACAAAGATGGAAAAGTGGTGGCGTGCAAGGGCCCTTGTGAGGCAGATGGATCATCACAAACTTGTGGGAACAACGCTTCCGCGCCGTCCTCTTATGCAAAACTATTCAAGAGCGTTTGCCAACGTGCCTATAGCTATCCTTTTGATGATCAGCTAAGCACATTCACATGTAAAGGTGCAGATTATAATATCACCTTTTGTGAATCCCCCTACACAAATTTGGAGACATCTGACTCCCCATCATGCACGGAAACAACCTTCACATCATTCCAACCCATCAAGGATCCAGATACACTAAGCTCCAAAGGGGGTTTGTTCACACTTGGGTTCTTCAGTCCTGGAAATTCTACAAATCGCTATGTGGGAATTTGGTACATGTCCAACTCCACTATTGTATGGGTAGCTAACAGGAATCGACCATTAAGGGATACTTCAGGAACTGTTACGATATCTGAAGATGGCAATCTTGTGGTATTAGATGGGCAAAACCAAACCATTTGGTCATCAAATGCATCAAATATTTCATCTACTACTAGTTGTCAGATTTTAGATTCTGGAAACCTTGTCCTAATCGATAACTCGATCGGAACCATATGGCAAAGTTTTGACCATCCTTCGGATTCATTGTTGCCAACAATGCAAATTACCAGCACCAAAAGAACAGGGGAGAAACAGAAGTTAACAGCATGGAAAAATCAGTCTGATCCAACCCTTGGTAATTTCTCTCTGAGCCTAGAACAACTAAATTTTGCAGAATTGTTCATATGGAATGCAACTAGCCCCTTTTGGCGTAGTGGTCCATGGAATGACCAAGAACTTTCGACAGTCCTCAAGATGAGTTCCGAGAACTATAATGGTGCCAAAGAGATGGTTGTTAGCTTATCAAATGGGTCAGACATCAAAGAGATAGTTGTTTTGAATTCGAAGGGAAAGTTATTATATAAACAATGGGATGATGCTAAGAAGCAATGGCAAGAAACCAATCTTGTTCAAAATTCAGATTGTGATGTTTATGGCATATGTGGGGAATTCGGAATATGCAATTCAACGCGTGCACCAATCTGCAGTTGTTTGAGTGGGTTTGAACCAAGAAATAGGGAGGAATGGAATAGACAAAATTGGACAGGTGGTTGTGTTAGGAAATCACCTCTGCAATGTGAGAGAGTAAAAAATGAGAATTCCAATGGAAAGGAAGATACATTTCTCCCTCTGTACAATGTAAAGGCACCAGACTTAGGAGGACAATCATCTAATTCAGAAGATAAATGCAGAATCCAGTGCTTGGAGAACTGCACTTGTAAAGCATATTCATATGATTCAGTGCTTGGCTGTATGACTTGGAAAGAAAATCTTATTGACATACAACAGTTCTCAAATGGAGGAATTGACCTATATATCCGTGCAGCCTATTTAGACTTTGATAAGAAGAGGCATAGAAAATTCATAATTATCATTATTGCAGTAATAGCAACCATCATTATCAGTGTCGCTTGTGCATGCTTCTTATGGAAGTGGAAGGCAAAACATTCAGCAGGAAAATGGAATAGCAAACAGTTCTTGTTAAAAAGGCATGGTGCAAATGTAGACAAAACAAGCGGAAAAACTATTGGACAAATATCAGAAGTTAAATTCCAGGAGTTATTGGTCTATAATTTTGAAAAAGTTGCAATGGCTACAAACAACTTTCAATTGACTAATAAACTTGGGCAAGGTGGTTTCGGTCTAGTCTATAAGGGAACACTACAAGATGGTCAGAATATCGCAGTTAAAAGACTATCAAGAACATCTGGACAAGGACAAGAGGAATTTATGAATGAAATGGTTGTCATTTCTAGGCTTCAACATCGTAATCTTGTAAAGCTTTTAGGTTGCTGTATTGAAAGTGTAACATTCTGA 2568 0.4046 MEQIREKFLYNGSFIHGAGILNLPTSQERLQSPAANRPVLSYEQTDFMIIYMDRLTEFFLFFIAVLQFISGITSTEFTVINKCNYTVWPGISSVAGNNDNPLSTTGFVLKTGESKIISAPPSWNGRFWGRTQCTQDSTGRNFSCLTGDCGSGKLECQGRVGTLPVTLIEISLGQFQGLDFYDVSLIDGFNVPVAVVPRGGCGGCKSTYCLADMISLCPSELRVMNKDGKVVACKGPCEADGSSQTCGNNASAPSSYAKLFKSVCQRAYSYPFDDQLSTFTCKGADYNITFCESPYTNLETSDSPSCTETTFTSFQPIKDPDTLSSKGGLFTLGFFSPGNSTNRYVGIWYMSNSTIVWVANRNRPLRDTSGTVTISEDGNLVVLDGQNQTIWSSNASNISSTTSCQILDSGNLVLIDNSIGTIWQSFDHPSDSLLPTMQITSTKRTGEKQKLTAWKNQSDPTLGNFSLSLEQLNFAELFIWNATSPFWRSGPWNDQELSTVLKMSSENYNGAKEMVVSLSNGSDIKEIVVLNSKGKLLYKQWDDAKKQWQETNLVQNSDCDVYGICGEFGICNSTRAPICSCLSGFEPRNREEWNRQNWTGGCVRKSPLQCERVKNENSNGKEDTFLPLYNVKAPDLGGQSSNSEDKCRIQCLENCTCKAYSYDSVLGCMTWKENLIDIQQFSNGGIDLYIRAAYLDFDKKRHRKFIIIIIAVIATIIISVACACFLWKWKAKHSAGKWNSKQFLLKRHGANVDKTSGKTIGQISEVKFQELLVYNFEKVAMATNNFQLTNKLGQGGFGLVYKGTLQDGQNIAVKRLSRTSGQGQEEFMNEMVVISRLQHRNLVKLLGCCIESVTF 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01424 855 ProSiteProfiles Thaumatin family profile. 74 291 IPR001938 -
Accr2g01424 855 Gene3D - 305 426 IPR036426 -
Accr2g01424 855 PRINTS Pathogenesis-related protein signature 282 291 IPR001938 -
Accr2g01424 855 PRINTS Pathogenesis-related protein signature 179 195 IPR001938 -
Accr2g01424 855 PRINTS Pathogenesis-related protein signature 76 88 IPR001938 -
Accr2g01424 855 PRINTS Pathogenesis-related protein signature 126 137 IPR001938 -
Accr2g01424 855 ProSiteProfiles PAN/Apple domain profile. 610 693 IPR003609 -
Accr2g01424 855 SMART tha2 77 292 IPR001938 -
Accr2g01424 855 SMART ntp_6 620 692 IPR003609 -
Accr2g01424 855 ProSiteProfiles Protein kinase domain profile. 786 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01424 855 CDD PAN_AP_plant 607 691 - -
Accr2g01424 855 Pfam Thaumatin family 81 291 IPR001938 -
Accr2g01424 855 SUPERFAMILY Protein kinase-like (PK-like) 764 852 IPR011009 -
Accr2g01424 855 ProSiteProfiles Bulb-type lectin domain profile. 308 427 IPR001480 -
Accr2g01424 855 SUPERFAMILY alpha-D-mannose-specific plant lectins 345 493 IPR036426 -
Accr2g01424 855 Pfam D-mannose binding lectin 354 455 IPR001480 -
Accr2g01424 855 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 759 854 - -
Accr2g01424 855 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 217 852 - -
Accr2g01424 855 Gene3D Phosphorylase Kinase; domain 1 748 854 - -
Accr2g01424 855 CDD TLP-PA 76 291 - -
Accr2g01424 855 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 305 426 - -
Accr2g01424 855 FunFam THAUMATIN-LIKE PROTEIN 1 75 292 - -
Accr2g01424 855 Pfam PAN-like domain 620 678 IPR003609 -
Accr2g01424 855 CDD B_lectin 315 429 IPR001480 -
Accr2g01424 855 ProSitePatterns Protein kinases ATP-binding region signature. 792 814 IPR017441 GO:0005524
Accr2g01424 855 Gene3D Thaumatin 75 291 IPR037176 -
Accr2g01424 855 SMART blect_4 314 429 IPR001480 -
Accr2g01424 855 Pfam S-locus glycoprotein domain 487 588 IPR000858 GO:0048544
Accr2g01424 855 Pfam Protein tyrosine and serine/threonine kinase 787 852 IPR001245 GO:0004672|GO:0006468
Accr2g01424 855 SUPERFAMILY Osmotin, thaumatin-like protein 76 291 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01424 Accr-Chr2 44749914 44753122 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01424 774 851 Receptor kinase-like Gene Family AT5G38280 49.367 3.96e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr2g01424 Thaumatin 6.7e-64 CL0293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01424 - - pcin:129286414 632.098