Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01416 ATGAGTCAGTGGAGTTGTGAAGACGAGAGGCGGTTTCAAGTTGCTCTATTTTGTTATCCGGAGGATTATCCCAATCGATGGGAGAGGATTGCAGAGGTGGTAGGGTTCTCCAAGGAGATGGTTTACCAACAATATCAAATTCTCCAATTTGAATTGGGTCAGGTTTCACAACCACAATACACAAACTCTTCCACCAATGATCAGCCCCACAAGAATAAGCGCTCCACTTGGACTTTGGAAGAACATGCACTATTCTTACTGGGAGTGAGGAAATATGGCCGGGGACATTGGAAGGATATCTCTGAAAAGGCGGTGGTGACAAGGAGTGCAACTCAGGTGGCAAGCCATGCTCAAAAGTTTTATATTCGCCAAAAAGAAAAAGAGATGATAGTGCATAGTAGAAGCAGCATCCATGATTTCACTTTGGCAAACTATCCACCAAAATATGTGAATCATCTTCTTTCTTCACGTCCTCACTTGATGCCTGGCTCATGCATGACAATGCAACAGCCCAACTCATCAATTCATAGTCATCTTCCACTACATCATGACTATCACTTACTACCGATAACTCAATCACTGCCAATGAATCAAGGGGAGCAGCTGTCTGACATACAATATCCTTATCGTACTATTCTTCCACTGCAAAACCAACCATTGAATCATCAGTTTCTGCCATAA 681 0.4288 MSQWSCEDERRFQVALFCYPEDYPNRWERIAEVVGFSKEMVYQQYQILQFELGQVSQPQYTNSSTNDQPHKNKRSTWTLEEHALFLLGVRKYGRGHWKDISEKAVVTRSATQVASHAQKFYIRQKEKEMIVHSRSSIHDFTLANYPPKYVNHLLSSRPHLMPGSCMTMQQPNSSIHSHLPLHHDYHLLPITQSLPMNQGEQLSDIQYPYRTILPLQNQPLNHQFLP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01416 226 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 73 125 IPR017930 -
Accr2g01416 226 SMART sant 73 123 IPR001005 -
Accr2g01416 226 SMART sant 1 51 IPR001005 -
Accr2g01416 226 Pfam Myb-like DNA-binding domain 74 119 IPR001005 -
Accr2g01416 226 ProSiteProfiles SANT domain profile. 75 125 IPR017884 -
Accr2g01416 226 NCBIfam myb-like DNA-binding domain, SHAQKYF class 72 124 IPR006447 GO:0003677
Accr2g01416 226 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 172 IPR043363 -
Accr2g01416 226 CDD SANT 76 120 IPR001005 -
Accr2g01416 226 Gene3D - 1 57 - -
Accr2g01416 226 Gene3D - 75 126 - -
Accr2g01416 226 ProSiteProfiles Myb-like domain profile. 69 121 IPR001005 -
Accr2g01416 226 SUPERFAMILY Homeodomain-like 2 48 IPR009057 -
Accr2g01416 226 SUPERFAMILY Homeodomain-like 70 126 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01416 Accr-Chr2 44584134 44584920 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr2g01416 Myb_DNA-binding 4.4e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01416 - - twl:119989322 121.709