Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01396 ATGGAACGCGATTTTCTGGGTTTGAGTTCAAAGATCAGTTCGGCGACTAAGAAAGAGGATGCTACTGATAAAGCAAACAATCCAGGAATGCAGTGGTCGTTTTCAAACAAGGTTTCTGCTGTTCCTCAATTGTTGTCCTTTAAGACTTCTCCGGAAGATAGGACAAGAAAGACCACATCATCAGCTGATGCTTTTGACTCTAACCAGAAACCATTCATGGATGTAATCCAGAAAAGCTTGAGCACGGGAAAACTAGTAGGAAATGAACGTGGAATGACAGTTTACCCTATGCAACAAGTTGATACACTTTCAAGCTACCCTCAAGAAGCCAGAACATTTTCAGTCTCCAACCAATCAAATCAGAGGAGTACTGTTCTCCAGTCTACTGTGAGTACCAACATTCAGAACATGGTCAATCCTGCCATAAAACCACACCCTCAAGTAGGAGTTCCTCTTATTGCCCCTGTACCTGTTCTTCCATCAAATGGTTCCGTTGTTGGCACCACTGACTTAAGGAACTCGTCGGAACCCTCTGTCCAACCTTCTCAGCTGACCATTTTCTATGCTGGTTCAGTGTCTGTTTATGAAGACATATCACCTGAGAAGGCCCAGGCTATTATGTTATTGGCTGGAAATGGGAATACTCCAAATCAAAACAAGGCAGTTTCAACAGCTCCAGTGCAGACACCAATCTCCAAGCCATCTAAAGATGATGGGTTTATTGTAAGCCAATCCTACCATTCGCCTTTACCGAGTTCGATTCCCATGACCTTCCATGTTAGTTCTCAGCCTGTAGGAGGATCTCCTAGCACCAATGAACCTGCAATTGTGAGACCAGTAGCATCTTCTGCTGCCCCAAGTAGCCACTTGGAGCCTCCTAGTGTAGCTGGCTCTTCAAAATCTGCAGCCACAAAAATTGGTTCACCTGTTGACTTACCTCAGGCACGGAAGGCATCCTTGACTCGGTTCTTAGAGAAGCGTAAGGAAAGGGTGACAAGCACATCACCATACAATATGAACAAGAAATCACCAGAATGTGGCAATCCGGGAGCAGATCGTATTAGTTTCTCCATCACTTCCAATGGTTCCTGTCCCCTACCTGCCATAAACTAA 1113 0.4483 MERDFLGLSSKISSATKKEDATDKANNPGMQWSFSNKVSAVPQLLSFKTSPEDRTRKTTSSADAFDSNQKPFMDVIQKSLSTGKLVGNERGMTVYPMQQVDTLSSYPQEARTFSVSNQSNQRSTVLQSTVSTNIQNMVNPAIKPHPQVGVPLIAPVPVLPSNGSVVGTTDLRNSSEPSVQPSQLTIFYAGSVSVYEDISPEKAQAIMLLAGNGNTPNQNKAVSTAPVQTPISKPSKDDGFIVSQSYHSPLPSSIPMTFHVSSQPVGGSPSTNEPAIVRPVASSAAPSSHLEPPSVAGSSKSAATKIGSPVDLPQARKASLTRFLEKRKERVTSTSPYNMNKKSPECGNPGADRISFSITSNGSCPLPAIN 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01396 370 MobiDBLite consensus disorder prediction 26 49 - -
Accr2g01396 370 Pfam tify domain 180 211 IPR010399 -
Accr2g01396 370 MobiDBLite consensus disorder prediction 326 354 - -
Accr2g01396 370 MobiDBLite consensus disorder prediction 287 305 - -
Accr2g01396 370 MobiDBLite consensus disorder prediction 219 246 - -
Accr2g01396 370 MobiDBLite consensus disorder prediction 281 314 - -
Accr2g01396 370 SMART tify_2 177 212 IPR010399 -
Accr2g01396 370 Pfam Jas motif 313 337 IPR018467 -
Accr2g01396 370 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 29 348 IPR040390 -
Accr2g01396 370 MobiDBLite consensus disorder prediction 1 66 - -
Accr2g01396 370 ProSiteProfiles Tify domain profile. 177 212 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01396 Accr-Chr2 44206934 44210656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01396 30 343 Tify Gene Family AT3G17860 37.500 3.73e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr2g01396 tify 1.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01396 K13464 - gmx:100807288 372.089