Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01394 ATGGAACGCGATTTTCTGGGTTTGAGTTCAAAGATCAGTTCGGCGACTAAGAAAGAGGATGCTACTGATAAAGCAAACAATCCAGTGAAAGGTTCAGGAATGCAGTGGTCGTTTTCAAACAAGGTTTCTGCTGTTCCTCAATTGTTGTCCTTTAAGACTTCTCCGGAAGATAGGACAAGAAAGACCACATCATCAGCTGATGCTTTTGACTCTAACCAGAAACCATTCATGGATGTAATCCAGAAAAGCTTGAGCACGGGAAAACTAGTAGGAAATGAACGTGGAATGACAGTTTACCCTATGCAACAAGTTGATACACTTTCAAGCTACCCTCAAGAAGCCAGAACATTTTCAGTCTCCAACCAATCAAATCAGAGGAGTACTGTTCTCCAGTCTACTGTGAGTACCAACATTCAGAACATGGTCAATCCTGCCATAAAACCACACCCTCAAGTAGGAGTTCCTCTTATTGCCCCTGTACCTGTTCTTCCATCAAATGGTTCCGTTGTTGGCACCACTGACTTAAGGAACTCGTCGGAACCCTCTGTCCAACCTTCTCAGCTGACCATTTTCTATGCTGGTTCAGTGTCTGTTTATGAAGACATATCACCTGAGAAGGCCCAGGCTATTATGTTATTGGCTGGAAATGGGAATACTCCAAATCAAAACAAGGCAGTTTCAACAGCTCCAGTGCAGACACCAATCTCCAAGCCATCTAAAGATGATGGGTTTATTGTAAGCCAATCCTACCATTCGCCTTTACCGAGTTCGATTCCCATGACCTTCCATGTTAGTTCTCAGCCTGTAGGAGGATCTCCTAGCACCAATGAACCTGCAATTGTGAGACCAGTAGCATCTTCTGCTGCCCCAAGTAGCCACTTGGAGCCTCCTAGTGTAGCTGGCTCTTCAAAATCTGCAGCCACAAAAATTGGTTCACCTGTTGACTTACCTCAGGCACGGAAGGCATCCTTGACTCGGTTCTTAGAGAAGCGTAAGGAAAGGGTGACAAGCACATCACCATACAATATGAACAAGAAATCACCAGAATGTGGCAATCCGGGAGCAGATCGTATTAGTTTCTCCATCACTTCCAATGGTTCCTGTCCCCTACCTGCCATAAACTAA 1125 0.448 MERDFLGLSSKISSATKKEDATDKANNPVKGSGMQWSFSNKVSAVPQLLSFKTSPEDRTRKTTSSADAFDSNQKPFMDVIQKSLSTGKLVGNERGMTVYPMQQVDTLSSYPQEARTFSVSNQSNQRSTVLQSTVSTNIQNMVNPAIKPHPQVGVPLIAPVPVLPSNGSVVGTTDLRNSSEPSVQPSQLTIFYAGSVSVYEDISPEKAQAIMLLAGNGNTPNQNKAVSTAPVQTPISKPSKDDGFIVSQSYHSPLPSSIPMTFHVSSQPVGGSPSTNEPAIVRPVASSAAPSSHLEPPSVAGSSKSAATKIGSPVDLPQARKASLTRFLEKRKERVTSTSPYNMNKKSPECGNPGADRISFSITSNGSCPLPAIN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01394 374 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 30 352 IPR040390 -
Accr2g01394 374 SMART tify_2 181 216 IPR010399 -
Accr2g01394 374 Pfam tify domain 184 215 IPR010399 -
Accr2g01394 374 MobiDBLite consensus disorder prediction 291 309 - -
Accr2g01394 374 MobiDBLite consensus disorder prediction 330 374 - -
Accr2g01394 374 MobiDBLite consensus disorder prediction 49 70 - -
Accr2g01394 374 MobiDBLite consensus disorder prediction 223 250 - -
Accr2g01394 374 MobiDBLite consensus disorder prediction 285 318 - -
Accr2g01394 374 Pfam Jas motif 317 341 IPR018467 -
Accr2g01394 374 ProSiteProfiles Tify domain profile. 181 216 IPR010399 -
Accr2g01394 374 MobiDBLite consensus disorder prediction 357 374 - -
Accr2g01394 374 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01394 Accr-Chr2 44206934 44210656 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01394 34 347 Tify Gene Family AT3G17860 37.500 4.17e-46 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Accr2g01394 tify 1.3e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01394 K13464 - gmx:100807288 381.719