Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01350 ATGGACGGAGTAGTAGGAGGAGATCACGGAAACTCGTCGAATTCTATCTACAGAGAGTGTCTGCGAAACCATGCGGCGAGCCTCGGGAGCTACGCCACCGACGGCTGCGGGGAGTTCACGCTGGACGACACATCTCCGGGTGGGTGCCTGCAATGCGCTGCCTGTGGCTGCCACCGGAACTTCCACCGCAAGGTGACATGCCCACCGCCTCCGAGGCTGACAACGGGGGAGATGATGGAGTACAGCGGCGGAGAGGGGACGCCGCCGCCAAGCGGGGAGATGATGAGGACGACGACGACATCGACCGGGACGAATAAGAAGAGGTTCAGGACGAAGTTCACGGCGGAGCAGAGAGAGAAGATGATGGGATTCGCGGAGAAGCTAGGTTGGAAGTTGCAGAGGAAGGATCTAGACGATGAGATAGAGAGGTTCTGCAGAGGAGTGGGAGTGAGCAGACAAGTGTTCAAGGTTTGGATGCATAACCATAAGAACTCTTCTTCTTCCTCTTCTGCTTCTACTGGCAATGTCTCCTCTCTTACCCAGTAA 546 0.5659 MDGVVGGDHGNSSNSIYRECLRNHAASLGSYATDGCGEFTLDDTSPGGCLQCAACGCHRNFHRKVTCPPPPRLTTGEMMEYSGGEGTPPPSGEMMRTTTTSTGTNKKRFRTKFTAEQREKMMGFAEKLGWKLQRKDLDDEIERFCRGVGVSRQVFKVWMHNHKNSSSSSSASTGNVSSLTQ 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01350 181 MobiDBLite consensus disorder prediction 162 181 - -
Accr2g01350 181 MobiDBLite consensus disorder prediction 82 105 - -
Accr2g01350 181 FunFam Zinc-finger homeodomain protein 2 93 168 - -
Accr2g01350 181 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 17 64 IPR006456 -
Accr2g01350 181 SUPERFAMILY Homeodomain-like 98 164 IPR009057 -
Accr2g01350 181 Pfam ZF-HD protein dimerisation region 16 66 IPR006456 -
Accr2g01350 181 NCBIfam homeobox domain, ZF-HD class 106 164 IPR006455 -
Accr2g01350 181 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 15 165 - -
Accr2g01350 181 Gene3D - 91 170 - -
Accr2g01350 181 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 17 65 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01350 Accr-Chr2 43431549 43432094 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01350 17 165 ZF-HD Transcription Factor Family AT4G24660 47.126 6.37e-43 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Accr2g01350 ZF-HD_dimer 1.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01350 - - jre:109020973 238.81