LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr2g01343	ATGGCAGACACAAACTCTGTTGAAGTTATATTAGACTTTCTGAGGAAGAATCGTTTTACAAGGGCTGAAGCAGCATTGCGTGGTGAGCTTAATAGCCGTTCTGACTTAAATGGCTTTCTTGAGAAACTTTCCTTGGAAGAAAGAACGTTGCACAATAAGTCAGAAAGTGACAAGGGGAAGCCAGTAGTAGAAATTCAAGGGTCAGGTTCTCATAATACTGTTGACGTGTCAAAAGAACTAATTGTGAAGGAAATAGAGTGTGGGACTGGTAGGAATGAAACTGAAAGCAAATGGAAAAATGTACCTTCTGTTGGGGAACGGAATAAATTAAATGAAGTGGTTGGGGCAAGTGACAAAAGCTTAGCTTTCTCTAAAAGTCCAGAGGATGGTGTGTTGGATTTATACTCATGGAAGTTCAATTCTGGCAATGGTCCTGTGGAGCCTTTCCAAAATGATGTGGGCACAAGTTCCAACAGTAGTATGAAGGGCCTGTCATCTCAGCAATCAAAATATCAAACAAGTGAACCTCATGATGTGTCCAACACCATTGCAAAATCTGGAGAAAAAAATTCTGTTTCCACTGATAAGAAAGCCTCATGGCTTGGGGGTAGTATTACTAGAGCATCTGTGGAACCAAAGTATGAAGACTTGCAAGCCAAAGAACGTAGGGAGTCTGATCGGCAGCTTAAATATAACAATTCATCTTTTAAAGAGAACTTTGCTGATAATCCCTGGTCAACAACTGATGAGAATGTTTTTTCGTCTTCAGACATTTGGAGAGATTGTCCTGTTAAGACTGTTTTCCCCTTCTCTAAGGGTGATGTTTCTTCAAGTTGTGACAATGCACCTTATACGGACAAGAAAGAGGAAAAAAGAAGGTCAGACATAAGTGATATTCGTGCATCAATAAAAGAGCAAGTGGATGAAGTTGGTAGGGCCGTTTACTTAGGCAAGTCTCAAGGCAGTTCAGAACAGAAGACCATTGGTAGCATAAGTTTCCCTCTTGCACCTGGGAATCAGAAGGAAGAATTTCCTAGGCTTCCTCCAGTCAAACTAAAGTCAGAGGATAAGCCTTTGGCTATTAACTGGGAAGAAAAGTTTGAGCGTGATGGACCTTCTTCAAGAATAGCTGGTGCTGATGGTTCTTCAAGAATAGCTAGTGCTGATGGCTCCTTAATCATAGGATCATATCTGGATGTGCCTGTTGGACAAGAAATTAATCCTTCAGGTATGAGGAGGGCTACAGGAGGCAGTTGGCTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTGTCTGGTTTTGCTACAGTTGGTGATGGGTTGAGTGAATCTATTGACTATCCAAATGAATATTGGGACTCTGATGAATATGATGATGATGATGATGTTGGGTACATGAGACAGCCTATTGAGGATGAATCTTGGTTTTTGGCACATGAAATTGATTACCCTAGTGATAACGAAAAGGGGAATGGTCATGGAAGTGTTCCGGATCATCAGGACAGAGGTCCAGCCAAAGATGATGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTTTCTGGAGAGCAATATCTTCAAGCAAAGAATGTTGAACCGGTTACAGCTTCTGATGATCCTATTGGTCTAACAGTAACTGAAGTGTATGACAGGACTGATGGTGGTGACCTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAATCTCATGCGTGCAGAGCCTGGCTGGCAGGGCTTTGTCACACAGACAGATGACCTAATCATGCTTGGAGATGGGAAGGTTCTTAATGAGAGTGGAAGATTACGACTTGAGGATGTTTGTATGGATGATGATCAGCATGGTTCAATTAGGTCAATTGGAGTGGGGATTAACAGTGATGCTGCAGATATTGGCAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGCAGTGAAGGTGATTTAGAATATTTCCGTGACCATGATGTTGGATTTAGTGGCCCTAGACACTCTCATCATGATCTGAATAAGAAATCTACCAATAAATTGAGCAAATATAAGAAGAAAAATGATAAGAATGAATTAAATAAGCATGGCATTGAGGACGAAAAAGGCACATTCTTGCAGGTGAAACCTCACACTGATGGGAGCTTCTCATTTCCCTTATCCCTGAAAGATGGTCCAACAGTTCAGGCTGGCACTAGTAATCCCCTGTGGTCAAACTGCAATGCTGATGAGAATGATGACTGTCTTAACGCACTTGTGGGATCTGATGATATGCTTGCTTTATGGAAGCGGCAGAGCAGTGATTCTTCCCCCATGAAAAGTTTTAGGGATGAAAATAATGCTCATGTAAGGTCAACTAACTCTTCTCCAACAGTCTCAAATTATGGATATATTGAAAAAGAGCATGTCAAGCTTGAAGGGGATGTAAATGATGATGGTGCAAGGGAAGAAGATCTTGGGGCATCGTTGGAAGATGAAGAGGCTGCTGCTGTTCAAGAGCAAGTAAGGCAAATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAAGACAAAAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGCAATATCATGTCACTGAGTATCTTGGATCTGCTGCATTTAGCAAAGCTATACAGGCTCATGACCTGCATACTGGCGTGGATGTTTGTGTTAAAATTATAAAGAACAACAAAGACTTTTTTGATCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGACCCTGCGGACAAGTATCACATTCTTCGGTTGTATGATTATTTCTATTATAGAGAACATTTGCTAATCGTATGTGAGCTACTTAAAGCAAACTTATATGAATTTCATAAATTTAATAGAGAATCTGGGGGAGAAGTGTACTTCACAATGCCAAGATTGCAGTCAATAACCATTCAATGTCTGGAAGCGCTTCAGTTTCTGCACAGCCTTGGACTAATACATTGTGACTTGAAGCCCGAGAATATTTTGGTAAAAAGCTATAGCAGATGTGAGGTGAAGGTCATTGATCTTGGGAGTAGTTGTTTTGAGACAGATCACCTTTGTTCATATGTTCAGTCAAGGTCTTATCGAGCTCCAGAGGTTATTTTGGGACTCACATATGACAAGAAGATTGATATATGGTCACTTGGTTGCATCTTGGCGGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCGGCAACATTACTTGCCCGAGTGATTGGCATCATTGGTCCAATTGATCAAAGCATGCTTGCAAAAGGACGGGATACATACAAGTATTTCACCAAAAATCATATGCTTTATGAAAGGAATCAGGAAACCAACAGGTTGGAGTACCTTATTCCTAAGAAGACATCCTTGAGGCATAGATTGCCAATGGGAGATCAAGGCTTCATTGATTTTGTTGCGCATTTGCTTGAGATTAACCCAAAGAAGCGGCCTTCTGCATCAGAGGCCCTGAAGCACCCATGGTTATCATACCCATACGAACCCATATCATCCTGA	3579	0.4099	MADTNSVEVILDFLRKNRFTRAEAALRGELNSRSDLNGFLEKLSLEERTLHNKSESDKGKPVVEIQGSGSHNTVDVSKELIVKEIECGTGRNETESKWKNVPSVGERNKLNEVVGASDKSLAFSKSPEDGVLDLYSWKFNSGNGPVEPFQNDVGTSSNSSMKGLSSQQSKYQTSEPHDVSNTIAKSGEKNSVSTDKKASWLGGSITRASVEPKYEDLQAKERRESDRQLKYNNSSFKENFADNPWSTTDENVFSSSDIWRDCPVKTVFPFSKGDVSSSCDNAPYTDKKEEKRRSDISDIRASIKEQVDEVGRAVYLGKSQGSSEQKTIGSISFPLAPGNQKEEFPRLPPVKLKSEDKPLAINWEEKFERDGPSSRIAGADGSSRIASADGSLIIGSYLDVPVGQEINPSGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDDDVGYMRQPIEDESWFLAHEIDYPSDNEKGNGHGSVPDHQDRGPAKDDDDDQSFAEEDSYFSGEQYLQAKNVEPVTASDDPIGLTVTEVYDRTDGGDLMAQYDGQLMDEEELNLMRAEPGWQGFVTQTDDLIMLGDGKVLNESGRLRLEDVCMDDDQHGSIRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFRDHDVGFSGPRHSHHDLNKKSTNKLSKYKKKNDKNELNKHGIEDEKGTFLQVKPHTDGSFSFPLSLKDGPTVQAGTSNPLWSNCNADENDDCLNALVGSDDMLALWKRQSSDSSPMKSFRDENNAHVRSTNSSPTVSNYGYIEKEHVKLEGDVNDDGAREEDLGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGQYHVTEYLGSAAFSKAIQAHDLHTGVDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLTYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS	1192

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g01343	1192	Coils	Coil	833	853	-	-
	Accr2g01343	1192	MobiDBLite	consensus disorder prediction	146	197	-	-
	Accr2g01343	1192	PANTHER	DUAL SPECIFICITY PROTEIN KINASE	418	1183	-	-
	Accr2g01343	1192	SUPERFAMILY	Protein kinase-like (PK-like)	870	1185	IPR011009	-
	Accr2g01343	1192	MobiDBLite	consensus disorder prediction	448	468	-	-
	Accr2g01343	1192	MobiDBLite	consensus disorder prediction	50	69	-	-
	Accr2g01343	1192	Gene3D	Phosphorylase Kinase; domain 1	875	962	-	-
	Accr2g01343	1192	MobiDBLite	consensus disorder prediction	486	512	-	-
	Accr2g01343	1192	Pfam	Protein kinase domain	881	1183	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr2g01343	1192	MobiDBLite	consensus disorder prediction	486	518	-	-
	Accr2g01343	1192	ProSiteProfiles	Protein kinase domain profile.	881	1183	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr2g01343	1192	MobiDBLite	consensus disorder prediction	768	795	-	-
	Accr2g01343	1192	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	1007	1019	IPR008271	GO:0004672\|GO:0006468
	Accr2g01343	1192	FunFam	Putative serine/threonine-protein kinase dyrk2	875	962	-	-
	Accr2g01343	1192	CDD	PKc_DYRK_like	881	1183	-	-
	Accr2g01343	1192	FunFam	Serine/threonine-protein kinase ppk15	960	1184	-	-
	Accr2g01343	1192	Gene3D	Transferase(Phosphotransferase) domain 1	935	1183	-	-
	Accr2g01343	1192	SMART	serkin_6	881	1183	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g01343	Accr-Chr2	43222045	43235001	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr2g01343	880	1178	MAP Kinase Gene Family	AT5G19010	31.034	1.10e-29	124

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	CMGC_DYRK-PRP4	Accr2g01343		Pkinase	5.2e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g01343	-		-	gmx:100798608	1799.64