Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01342 ATGGCAGACACAAACTCTGTTGAAGTTATATTAGACTTTCTGAGGAAGAATCGTTTTACAAGGGCTGAAGCAGCATTGCGTGGTGAGCTTAATAGCCGTTCTGACTTAAATGGCTTTCTTGAGAAACTTTCCTTGGAAGAAAGAACGTTGCACAATAAGTCAGAAAGTGACAAGGGGAAGCCAGTAGTAGAAATTCAAGGGTCAGGTTCTCATAATACTGTTGACGTGTCAAAAGAACTAATTGTGAAGGAAATAGAGTGTGGGACTGGTAGGAATGAAACTGAAAGCAAATGGAAAAATGTACCTTCTGTTGGGGAACGGAATAAATTAAATGAAGTGGTTGGGGCAAGTGACAAAAGCTTAGCTTTCTCTAAAAGTCCAGAGGATGGTGTGTTGGATTTATACTCATGGAAGTTCAATTCTGGCAATGGTCCTGTGGAGCCTTTCCAAAATGATGTGGGCACAAGTTCCAACAGTAGTATGAAGGGCCTGTCATCTCAGCAATCAAAATATCAAACAAGTGAACCTCATGATGTGTCCAACACCATTGCAAAATCTGGAGAAAAAAATTCTGTTTCCACTGATAAGAAAGCCTCATGGCTTGGGGGTAGTATTACTAGAGCATCTGTGGAACCAAAGTATGAAGACTTGCAAGCCAAAGAACGTAGGGAGTCTGATCGGCAGCTTAAATATAACAATTCATCTTTTAAAGAGAACTTTGCTGATAATCCCTGGTCAACAACTGATGAGAATGTTTTTTCGTCTTCAGACATTTGGAGAGATTGTCCTGTTAAGACTGTTTTCCCCTTCTCTAAGGGTGATGTTTCTTCAAGTTGTGACAATGCACCTTATACGGACAAGAAAGAGGAAAAAAGAAGGTCAGACATAAGTGATATTCGTGCATCAATAAAAGAGCAAGTGGATGAAGTTGGTAGGGCCGTTTACTTAGGCAAGTCTCAAGGCAGTTCAGAACAGAAGACCATTGGTAGCATAAGTTTCCCTCTTGCACCTGGGAATCAGAAGGAAGAATTTCCTAGGCTTCCTCCAGTCAAACTAAAGTCAGAGGATAAGCCTTTGGCTATTAACTGGGAAGAAAAGTTTGAGCGTGATGGACCTTCTTCAAGAATAGCTGGTGCTGATGGTTCTTCAAGAATAGCTAGTGCTGATGGCTCCTTAATCATAGGATCATATCTGGATGTGCCTGTTGGACAAGAAATTAATCCTTCAGGTATGAGGAGGGCTACAGGAGGCAGTTGGCTATCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTGTCTGGTTTTGCTACAGTTGGTGATGGGTTGAGTGAATCTATTGACTATCCAAATGAATATTGGGACTCTGATGAATATGATGATGATGATGATGTTGGGTACATGAGACAGCCTATTGAGGATGAATCTTGGTTTTTGGCACATGAAATTGATTACCCTAGTGATAACGAAAAGGGGAATGGTCATGGAAGTGTTCCGGATCATCAGGACAGAGGTCCAGCCAAAGATGATGATGATGATCAATCTTTTGCTGAGGAGGATTCTTACTTTTCTGGAGAGCAATATCTTCAAGCAAAGAATGTTGAACCGGTTACAGCTTCTGATGATCCTATTGGTCTAACAGTAACTGAAGTGTATGACAGGACTGATGGTGGTGACCTAATGGCTCAATATGATGGACAATTGATGGATGAAGAAGAATTGAATCTCATGCGTGCAGAGCCTGGCTGGCAGGGCTTTGTCACACAGACAGATGACCTAATCATGCTTGGAGATGGGAAGGTTCTTAATGAGAGTGGAAGATTACGACTTGAGGATGTTTGTATGGATGATGATCAGCATGGTTCAATTAGGTCAATTGGAGTGGGGATTAACAGTGATGCTGCAGATATTGGCAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGCAGTGAAGGTGATTTAGAATATTTCCGTGACCATGATGTTGGATTTAGTGGCCCTAGACACTCTCATCATGATCTGAATAAGAAATCTACCAATAAATTGAGCAAATATAAGAAGAAAAATGATAAGAATGAATTAAATAAGCATGGCATTGAGGACGAAAAAGGCACATTCTTGCAGGTGAAACCTCACACTGATGGGAGCTTCTCATTTCCCTTATCCCTGAAAGATGGTCCAACAGTTCAGGCTGGCACTAGTAATCCCCTGTGGTCAAACTGCAATGCTGATGAGAATGATGACTGTCTTAACGCACTTGTGGGATCTGATGATATGCTTGCTTTATGGAAGCGGCAGAGCAGTGATTCTTCCCCCATGAAAAGTTTTAGGGATGAAAATAATGCTCATGTAAGGTCAACTAACTCTTCTCCAACAGTCTCAAATTATGGATATATTGAAAAAGAGCATGTCAAGCTTGAAGGGGATGTAAATGATGATGGTGCAAGGGAAGAAGATCTTGGGGCATCGTTGGAAGATGAAGAGGCTGCTGCTGTTCAAGAGCAAGTAAGGCAAATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAAGACAAAAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGCAATATCATGTCACTGAGTATCTTGGATCTGCTGCATTTAGCAAAGCTATACAGGCTCATGACCTGCATACTGGCGTGGATGTTTGTGTTAAAATTATAAAGAACAACAAAGACTTTTTTGATCAAAGCCTTGATGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGACCCTGCGGACAAGTATCACATTCTTCGGTTGTATGATTATTTCTATTATAGAGAACATTTGCTAATCGTATGTGAGCTACTTAAAGCAAACTTATATGAATTTCATAAATTTAATAGAGAATCTGGGGGAGAAGTGTACTTCACAATGCCAAGATTGCAGTCAATAACCATTCAATGTCTGGAAGCGCTTCAGTTTCTGCACAGCCTTGGACTAATACATTGTGACTTGAAGCCCGAGAATATTTTGTCAAGGTCTTATCGAGCTCCAGAGGTTATTTTGGGACTCACATATGACAAGAAGATTGATATATGGTCACTTGGTTGCATCTTGGCGGAACTTTGTACTGGCAATGTCCTCTTCCAAAATGATTCACCGGCAACATTACTTGCCCGAGTGATTGGCATCATTGGTCCAATTGATCAAAGCATGCTTGCAAAAGGACGGGATACATACAAGTATTTCACCAAAAATCATATGCTTTATGAAAGGAATCAGGAAACCAACAGGTTGGAGTACCTTATTCCTAAGAAGACATCCTTGAGGCATAGATTGCCAATGGGAGATCAAGGCTTCATTGATTTTGTTGCGCATTTGCTTGAGATTAACCCAAAGAAGCGGCCTTCTGCATCAGAGGCCCTGAAGCACCCATGGTTATCATACCCATACGAACCCATATCATCCTGA 3492 0.4104 MADTNSVEVILDFLRKNRFTRAEAALRGELNSRSDLNGFLEKLSLEERTLHNKSESDKGKPVVEIQGSGSHNTVDVSKELIVKEIECGTGRNETESKWKNVPSVGERNKLNEVVGASDKSLAFSKSPEDGVLDLYSWKFNSGNGPVEPFQNDVGTSSNSSMKGLSSQQSKYQTSEPHDVSNTIAKSGEKNSVSTDKKASWLGGSITRASVEPKYEDLQAKERRESDRQLKYNNSSFKENFADNPWSTTDENVFSSSDIWRDCPVKTVFPFSKGDVSSSCDNAPYTDKKEEKRRSDISDIRASIKEQVDEVGRAVYLGKSQGSSEQKTIGSISFPLAPGNQKEEFPRLPPVKLKSEDKPLAINWEEKFERDGPSSRIAGADGSSRIASADGSLIIGSYLDVPVGQEINPSGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESIDYPNEYWDSDEYDDDDDVGYMRQPIEDESWFLAHEIDYPSDNEKGNGHGSVPDHQDRGPAKDDDDDQSFAEEDSYFSGEQYLQAKNVEPVTASDDPIGLTVTEVYDRTDGGDLMAQYDGQLMDEEELNLMRAEPGWQGFVTQTDDLIMLGDGKVLNESGRLRLEDVCMDDDQHGSIRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFRDHDVGFSGPRHSHHDLNKKSTNKLSKYKKKNDKNELNKHGIEDEKGTFLQVKPHTDGSFSFPLSLKDGPTVQAGTSNPLWSNCNADENDDCLNALVGSDDMLALWKRQSSDSSPMKSFRDENNAHVRSTNSSPTVSNYGYIEKEHVKLEGDVNDDGAREEDLGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGQYHVTEYLGSAAFSKAIQAHDLHTGVDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILSRSYRAPEVILGLTYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS 1163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01342 1163 SUPERFAMILY Protein kinase-like (PK-like) 870 1156 IPR011009 -
Accr2g01342 1163 Coils Coil 833 853 - -
Accr2g01342 1163 MobiDBLite consensus disorder prediction 146 197 - -
Accr2g01342 1163 Gene3D Phosphorylase Kinase; domain 1 875 962 - -
Accr2g01342 1163 MobiDBLite consensus disorder prediction 486 518 - -
Accr2g01342 1163 Gene3D Transferase(Phosphotransferase) domain 1 935 1019 - -
Accr2g01342 1163 SMART serkin_6 881 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01342 1163 MobiDBLite consensus disorder prediction 768 795 - -
Accr2g01342 1163 FunFam Putative serine/threonine-protein kinase dyrk2 875 962 - -
Accr2g01342 1163 MobiDBLite consensus disorder prediction 448 468 - -
Accr2g01342 1163 CDD PKc_DYRK_like 881 1154 - -
Accr2g01342 1163 PANTHER DUAL SPECIFICITY PROTEIN KINASE 418 1018 - -
Accr2g01342 1163 ProSiteProfiles Protein kinase domain profile. 881 1154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr2g01342 1163 Gene3D Transferase(Phosphotransferase) domain 1 1020 1154 - -
Accr2g01342 1163 MobiDBLite consensus disorder prediction 50 69 - -
Accr2g01342 1163 MobiDBLite consensus disorder prediction 486 512 - -
Accr2g01342 1163 Pfam Protein kinase domain 881 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01342 Accr-Chr2 43222045 43235001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01342 885 1154 Core Cell Cycle Gene Families AT1G76540 27.419 2.96e-23 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Accr2g01342 Pkinase 3.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01342 - - gmx:100798608 1724.14