Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01340 ATGTGTAGTAGAGGCCATTGGAGGCCAGCCGAGGATGAGAAACTTCGAGAGTTGGTGGAGCGTTATGGTCCTCATAATTGGAACGCCATAGCTGAAAAGCTTCGAGGAAGATCGGGGAAGAGCTGCAGGTTGAGGTGGTTTAATCAACTGGACCCAAGAATAAATAGGAGTCCATTCACAGAGGAGGAAGAAGAGAGGCTTGTGGCTTCTCACAGGATCCATGGAAACAGATGGGCTGTGATTGCCAGGCATTTCCCAGGACGAACTGATAATGCTGTGAAGAACCACTGGCACGTTATGATGGCCAGGATTCGCAGAGAAAAGTCCAAGCTTTTTTCCAAACAACGCCCTCTTCATCATCACAATCAGCTCACTACTTCTACACCATCTGATCCTGCTCCTGATCATCAGGATCGTCACACAAACTTATATGATCATACACCAAAGACGATGATGATTAGACCTGTTGTTGTTCCTGCCTTCTTTGAGAAATACTATGATAAACATGCCTTCCCTGCTTATTGTCTTCCTTATTATAATAACCCTTTCCTTCAATCTCCCAACAAGTTTCATCGACAACTTCAGCACCGCTCTTCCTCTTCATCAGTTCTTCATGATAAAAGTGAGTCAGTTGAGTTCTATGACTTTCTTCAAGTGAACACTGATTCAAATAATAGAAGCGAGGTGACAGACAATGCAAGAAGGGAAGACGAGGAAGTGAATCAAGACAGTGAACATAATAATGTGGGAGGACGAGGACGACAGAACAAAGACGGTGTTGGGGGTGCTCCGTTTATAGATTTTTTGTCTGTTAATGGAAGCTAG 825 0.4424 MCSRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEERLVASHRIHGNRWAVIARHFPGRTDNAVKNHWHVMMARIRREKSKLFSKQRPLHHHNQLTTSTPSDPAPDHQDRHTNLYDHTPKTMMIRPVVVPAFFEKYYDKHAFPAYCLPYYNNPFLQSPNKFHRQLQHRSSSSSVLHDKSESVEFYDFLQVNTDSNNRSEVTDNARREDEEVNQDSEHNNVGGRGRQNKDGVGGAPFIDFLSVNGS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01340 274 Gene3D - 57 123 - -
Accr2g01340 274 MobiDBLite consensus disorder prediction 118 132 - -
Accr2g01340 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Accr2g01340 274 MobiDBLite consensus disorder prediction 224 261 - -
Accr2g01340 274 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Accr2g01340 274 SMART sant 55 103 IPR001005 -
Accr2g01340 274 SMART sant 3 52 IPR001005 -
Accr2g01340 274 MobiDBLite consensus disorder prediction 111 145 - -
Accr2g01340 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Accr2g01340 274 Pfam Myb-like DNA-binding domain 7 67 - -
Accr2g01340 274 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Accr2g01340 274 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Accr2g01340 274 FunFam MYB transcription factor 4 55 - -
Accr2g01340 274 PANTHER MYB PROTEIN-RELATED 4 168 - -
Accr2g01340 274 Gene3D - 4 55 - -
Accr2g01340 274 CDD SANT 58 101 IPR001005 -
Accr2g01340 274 CDD SANT 7 48 IPR001005 -
Accr2g01340 274 MobiDBLite consensus disorder prediction 228 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01340 Accr-Chr2 43170768 43172152 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01340 1 274 MYB Transcription Factor Family AT1G17950 50.890 2.71e-78 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr2g01340 Myb_DNA-bind_6 1.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01340 K09422 - gmx:100811746 326.25