Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01332 ATGGCGGATTTGGAAAAAGATGAGGTGCCAATGCTGTTGGAGACAAAGCAACCATCAGTTGAATTGGTGGAGTCTAAATTACAGAGGCTTATATCTAGGACACGAAGTGCATCAATGTCTATTCCTATGAGCTCCATGGAGTCATATGAGCGAGAAACTAGTCTTGTGGGACATACTGGTCCACTGAGGAGTGAGAGGAAAACCCCGTTTGTGCAGATGAGTGGTCCACTACATGTCACCAGCAGACATGGAAATCTGTCCCGGCAAAATGTCAATGCCACAGGGAACAAAGCAGTGGAGAGCATGCCAGAAAAAATTGCTTTGCATGGAAGAGTTGGTAATGATTGGCAGAACAACCATGCCCACAAAAATGAACACTTACTGAGGTCGGGGCAATTGGGAATGTGTAATGATCCTTATTGTACAACTTGCCCTACTTACTTCAAGACCTCTCAGCAAAGGAATCCTAAGGCTTCTGGTTTATTTGATCCCAAGTTTCACAATGCTTTCTATGGAGATGCTAAGGGTTGTGCAAGAAGATTTATTTCTTTTCTGTCTTCATATGTCCCTGGAGTTATGAATCCTCATACTAAAATTGTACAGCATTGGAGCAAATTTTTCGCCATTTCTTGCATAGTGGCCATTTTTGTGGATCCATTATTTTTCTTCTTGCTCGGTGTAAAACAGGAGGAAAACTGTATTTTCATCGACTGGAAGATGACATGGGCACTTGTTTGTGTTAGATCCATGAATGATTTTGTATACTTCCTAAACATGCTTCTTCAGTTTAGGTTGGCATATGTGGCTCCTGACTCTAGGGTGGTTGGTGCTGGCGATTTAGTTGACCATCCAAAAAAAATTGCTCTCCATTATTTGAAGGGTTATTTTTTTGTGGACTTATTTGTTGTGTTTCCACTTCCTCAGATAATGATATTGTTTGCCCTACCATATCACTTGGGTTCATCAGGAGCAAATTATGCTAAGAATCTTCTGCGTCTAGCACTCCTTGTTCAGTATATTCCCAGATTGTGCAGGTTTCTTCCTCTTCTAATTGGTCAGTCTTCAAGTGGATTGATATTTGAGTCAGCATGGGAAAATTTCTTTATAAATCTGCTCACCTTTGTGCTATCTGGCCATGTTATTGGGTCTTGTTGGTATCTCTTTGGTCTACAGAGGGTCAACCAATGTCTTCGAAATGCCTGTCATAGTGAGAAATTTGATGGCTGCATGGAATTGATTGATTGTGGGCATGTCCGTTTGAATGAATTTTGGTTAAACAGTACTGGTGCAGCCAGTTGTTTCAATGCCACAGACGGAGTCACAGTTGAAGGTTTTGATTATGGGATCTATGATAAAGCTGTTAACCTTGTTGCAGAACCAAGTGTGATTACGAGATATGTGTATTCATTATTTTGGGGATTCCAGCAAATCAGTACTCTAGCTGGGAATCTAGTCCCAAGCTATTTTGTCTGGGAAGCCCTTTTTACAATGGGCATCATAGGACTGGGACTGTTGCTTTTTGCTCTTCTCATTGGAAATATACAGAACTTTCTTCAGGCTCTTGGACGGAGGAGGCTTGAAATGTCACTTAGACGTCGTGATGTGGATCAATGGATGAGCCACCGGCGTTTGCCAGAGGATTTAAGAAGGAGAGTAATACTGGCTGAACGATATAATTGGGCTGCAACCAGAGGCGTAAATGAAGTAATGCTTCTGGAGAGTCTGCCAGAGGATCTTCAGAGAGACATTAGACGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTTGCCCTGCTGGATGAACCTATCTTAGATGTCATTTGTGAGAGACTAAGACAAAAAACATACATCAAAGGAAGCAATATTCTGTATCATGGCGGTCTGGTAGACAAAATGGTGTTTGTGGTGCGTGGAAGATTGGAGAGCATTGGAGATGATGGGATTAGGGTTCCCTTGGTTGAAGGGGATGTGTTTGGTGAAGAACTCCTGACTTGGTGTCTCGAACATTCTTCTGTGAGCAGAGATGGTAAAAAAGTAAGGCTTCCTGGACAAAGATTGCTCAGCAACCGGACCGTATGTTGCTTAACAAATGTGGAGGCATTTGCACTCCGATACGCAGACCTCGAAGAAGTCACGAGCCTTTTTACAAGATTCCTAAGAAATGCGCGGGTTCAAGGAGCCATAAGGTATGAATCGCCATATTGGAGAAGCCTTGCTGCAACTCGAATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTCATGCGTGCGGATACCTCACAGTCAAATCATTAG 2298 0.4238 MADLEKDEVPMLLETKQPSVELVESKLQRLISRTRSASMSIPMSSMESYERETSLVGHTGPLRSERKTPFVQMSGPLHVTSRHGNLSRQNVNATGNKAVESMPEKIALHGRVGNDWQNNHAHKNEHLLRSGQLGMCNDPYCTTCPTYFKTSQQRNPKASGLFDPKFHNAFYGDAKGCARRFISFLSSYVPGVMNPHTKIVQHWSKFFAISCIVAIFVDPLFFFLLGVKQEENCIFIDWKMTWALVCVRSMNDFVYFLNMLLQFRLAYVAPDSRVVGAGDLVDHPKKIALHYLKGYFFVDLFVVFPLPQIMILFALPYHLGSSGANYAKNLLRLALLVQYIPRLCRFLPLLIGQSSSGLIFESAWENFFINLLTFVLSGHVIGSCWYLFGLQRVNQCLRNACHSEKFDGCMELIDCGHVRLNEFWLNSTGAASCFNATDGVTVEGFDYGIYDKAVNLVAEPSVITRYVYSLFWGFQQISTLAGNLVPSYFVWEALFTMGIIGLGLLLFALLIGNIQNFLQALGRRRLEMSLRRRDVDQWMSHRRLPEDLRRRVILAERYNWAATRGVNEVMLLESLPEDLQRDIRRHLFKFVKKVRIFALLDEPILDVICERLRQKTYIKGSNILYHGGLVDKMVFVVRGRLESIGDDGIRVPLVEGDVFGEELLTWCLEHSSVSRDGKKVRLPGQRLLSNRTVCCLTNVEAFALRYADLEEVTSLFTRFLRNARVQGAIRYESPYWRSLAATRIQVAWRYRKKRLMRADTSQSNH 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01332 765 Gene3D - 196 521 - -
Accr2g01332 765 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 136 758 - -
Accr2g01332 765 ProSiteProfiles cAMP/cGMP binding motif profile. 596 664 IPR000595 -
Accr2g01332 765 SUPERFAMILY Voltage-gated potassium channels 195 525 - -
Accr2g01332 765 SUPERFAMILY cAMP-binding domain-like 524 720 IPR018490 -
Accr2g01332 765 Pfam Ion transport protein 205 524 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Accr2g01332 765 SMART cnmp_10 596 731 IPR000595 -
Accr2g01332 765 CDD CAP_ED 596 712 IPR000595 -
Accr2g01332 765 Gene3D Helix hairpin bin 524 588 - -
Accr2g01332 765 Gene3D Jelly Rolls 594 718 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01332 Accr-Chr2 43009398 43019275 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01332 5 674 Ion Channels AT3G17700 61.799 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01332 K05391 - qsa:O6P43_005264 1121.69