Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01325 ATGGAGTACGGGACGGGAGGCGGTGGTGGGTCCCCCGGGGACCACCACCACCACCACCTTCGCGACGGTTCTGATTCGCAGAGGGACAAGAAGCGATACCACCGTCACACTGCTAACCAGATTCAGAGACTTGAATCAATGTTCAAGGAGTGCCCCCACCCAGATGAAAAGCAGAGATTACAGTTAAGCAGGGAACTAGGCTTGGCCCCTAGGCAGATCAAGTTTTGGTTCCAGAACCGGAGGACCCAGATGAAGGCCCAGCACGAGAGATCAGATAACTGTGCTCTTAGATCAGAGAACGACAAGATTCGGTGCGAGAACATAGCTATCAGAGAGGCCCTCAAAAATGTCATTTGCCCTTCTTGTGGTGGCCCTCCTTGTCACGAAGATTCCTACTTCGACGAGCAAAAGCTTCGTTTAGAGAATGCTCAATTGAAAGAAGAGCTTGATAGAGTATCCAGCATTGCGGCTAAATACATAGGGAGGCCAATTTCTCAGCTCCCTCCGGTTCAGCCTATTCATATCTCATCTCTGGACTTGTCAATGTCGAGTTTTGGGGGCCAACCCATGCTGGTTGGTGGTCCTGGTCCTTCTCTTGATCTTGATCTTCTTCCTGGGAGTTCTTCGTCGTCGGCGGTTCCCAGCTTGTCTTACCAGGCGCAGGTAGTGGCGGCTTCTTTCTCCGATGTAGATAAGTCCCTCATGTCGGACATGGCCGGCAATGCCATGGACGAACTGCTCAGGCTTTTGCAGACCAATGAACCCCTTTGGATAAAGTCAAACGCAGATGGTAGAGAAGTTCTTAGTCTTGACGCCTATGGAAACATGTTTCCTAGATCAAATACTCACGTCAAGAATCCCAATATTCATGCCGAAGCTTCTCGCGATTCTGGAGTTGTGATTATGAATAGCTTGGCCTTGGTCGACATGTTTATGGACCCTAACAAGTGGATGGAGCTATTTCCTACCATAGTTTCAATGGCAACTACTATTAAAGTGATATCTTCTGGAATGCTGGGTGGTCATAGTGGCGCTTTACAATTGATGTATGGAGAGCTTCAAGTGCTTACTCCACTGGTTCCAACTAGAGAATTCTACTTCCTGCGATACTGTCAGCAAATTGAGCAAGGTTCATGGGCAATTGTTGATGTTTCTTATGATTTCCCTCAAGATAACCAGTTTGCTCCTCAGTTTCGGTCTCATCGATTCCCGTCTGGCGTCTTGATCCAGGACATGCCTAATGGCTATTCTAAGGTGACTTGGGTTGAACATGTAGAGATTGAAGATAAAACACCAACCCATCGTCTTTACAGAAACCTCATCTACAGTGGCTTGGCTTTTGGAGCAGAAAGATGGCTCGCTACACTTCAAAGAATGTGTGAAAGATTCGCTTGCTTAATGGTTACCAGCAATTCAACTCGTGATCTTGGAGGAGTGATCCCTTCCCCGGAAGGCAAGAGGAGCATGATGAAACTTGCACAAAGGATGGTGGCCAATTTTTGCGCATGCCTCAGTGCATCTAACGGCCAAAGATGGACCACACTTTCTGGGCTTAACGAGGTTGGTGTCAGAGTCACCGTCCATAAGAGCATGGAGCCCGGCCAACCAAATGGCGTCGTACTGAGCGCAGCTACCACCATCTGGCTCCCCATCCCTCCCCAAACCGTCTTCAATTTCTTCAAGGATGAAAGAAAAAGACCTCAGTGGGATGTTCTTTCAAACGGGAGTGCCGTGCAAGAGGTTGCTCATATAGCCAATGGGTCTCACCCTGGGAACTGCATATCTGTTCTTCGAGCCTTCAACACGACTCAGAACAACATGTTGATACTGCAAGAGAGCTGCGTGGACTCATCAGGATCCCTTGTGGTGTACTGTCCGGTCGATCTTCCGATGATCAATGTTGCGATGAGTGGCGAGGACCCGTCGAGTATCCCGCTGCTTCCTTCCGGGTTCACAGTGGTGCCGGACGGGCAAGTGGAGGTAGGAGGCGGGGTTGGAGGAGATGGGGCGTCAAGCAGCTCGAGCACGGGGAGGAGACCAGGTGGGTCACTGATCACAGTGGCGTTTCAGATTCTGGTGAGCAGCCTGCCATCTGCGAAGCTGAACTTGGAGTCAGTGACGACCGTTAATAACCTCATTGGCACCACTGTTCACCAAATTAAGGCAGCCTTGAATTGTCCTACTACTTCCTGA 2193 0.4975 MEYGTGGGGGSPGDHHHHHLRDGSDSQRDKKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQHERSDNCALRSENDKIRCENIAIREALKNVICPSCGGPPCHEDSYFDEQKLRLENAQLKEELDRVSSIAAKYIGRPISQLPPVQPIHISSLDLSMSSFGGQPMLVGGPGPSLDLDLLPGSSSSSAVPSLSYQAQVVAASFSDVDKSLMSDMAGNAMDELLRLLQTNEPLWIKSNADGREVLSLDAYGNMFPRSNTHVKNPNIHAEASRDSGVVIMNSLALVDMFMDPNKWMELFPTIVSMATTIKVISSGMLGGHSGALQLMYGELQVLTPLVPTREFYFLRYCQQIEQGSWAIVDVSYDFPQDNQFAPQFRSHRFPSGVLIQDMPNGYSKVTWVEHVEIEDKTPTHRLYRNLIYSGLAFGAERWLATLQRMCERFACLMVTSNSTRDLGGVIPSPEGKRSMMKLAQRMVANFCACLSASNGQRWTTLSGLNEVGVRVTVHKSMEPGQPNGVVLSAATTIWLPIPPQTVFNFFKDERKRPQWDVLSNGSAVQEVAHIANGSHPGNCISVLRAFNTTQNNMLILQESCVDSSGSLVVYCPVDLPMINVAMSGEDPSSIPLLPSGFTVVPDGQVEVGGGVGGDGASSSSSTGRRPGGSLITVAFQILVSSLPSAKLNLESVTTVNNLIGTTVHQIKAALNCPTTS 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01325 730 MobiDBLite consensus disorder prediction 1 37 - -
Accr2g01325 730 SUPERFAMILY Bet v1-like 229 463 - -
Accr2g01325 730 SMART HOX_1 28 91 IPR001356 GO:0003677
Accr2g01325 730 FunFam Homeobox-leucine zipper protein HDG1 17 103 - -
Accr2g01325 730 SMART START_1 237 462 IPR002913 GO:0008289
Accr2g01325 730 MobiDBLite consensus disorder prediction 12 32 - -
Accr2g01325 730 Pfam Homeodomain 30 85 IPR001356 GO:0003677
Accr2g01325 730 ProSiteProfiles 'Homeobox' domain profile. 27 87 IPR001356 GO:0003677
Accr2g01325 730 SUPERFAMILY Bet v1-like 483 721 - -
Accr2g01325 730 CDD START_ArGLABRA2_like 232 461 - -
Accr2g01325 730 Gene3D - 15 101 - -
Accr2g01325 730 Pfam START domain 239 462 IPR002913 GO:0008289
Accr2g01325 730 ProSitePatterns 'Homeobox' domain signature. 62 85 IPR017970 GO:0000981|GO:0006355
Accr2g01325 730 FunFam Homeobox-leucine zipper protein GLABRA 2 237 461 - -
Accr2g01325 730 Coils Coil 135 155 - -
Accr2g01325 730 Gene3D - 239 461 IPR023393 -
Accr2g01325 730 CDD homeodomain 30 88 IPR001356 GO:0003677
Accr2g01325 730 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 28 725 IPR042160 -
Accr2g01325 730 SUPERFAMILY Homeodomain-like 9 87 IPR009057 -
Accr2g01325 730 ProSiteProfiles START domain profile. 228 465 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01325 Accr-Chr2 42756750 42760131 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01325 25 730 Homeobox Transcription Factor Family AT1G73360 67.560 0.0 950
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Accr2g01325 START 6.6e-50 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01325 K09338 - gmx:100809075 1146.34