Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01323 ATGGAGATGCAGAATCAAAAAGAGAGCACAATGTCCAAGAACTCCGGCATTGCCAGTAACCGCCATTCAGATGGCAGCACAAAATCTGAAAATGTTGTCTGCAGGAAGGATATAACTACTACAGGAGACAATTTTACTCCCAAGGCAAGGAAACCATATACCATTACTAAGCAAAGGGAAAAGTGGACAGAGGAGGAGCATCTGAAGTTCCTTGAAGCCTTGAAATTGTATGGCCGTGGTTGGCATCAAATTGAAGAACATGTAGGTACCAAAACTGCAGTTCAGATTCGAAGCCATGCACAGAAGTTCTTCTCTAAGGTTGTGCGGGAATCTGAGGGTTGCACTGAAAGTTCCATAAAGCCAACTGACATACCACCTCCTCGGCCAAAAAGGAAACCGTTGCATCCATATCCTCGCAACTTAGCTGACTCATTCAAAGGACACTCAAATGCATCAGAAAGATCTCCATCTCCAAACCTGTCAGCTGTGGCAAAAGACACCCAATCTCCAACCTCAGCGTTGTCTGCATTTGGTTCAGAAGCATTTGGATCAGCATTTTCTGAGAAAACTAATAGATGTCCTTCCCCATATTCTTGCACTACTGACATCCACTCGGTCAGTTTATCACCAGTTAGAAAAGAAAATGATTGTATTACATCCAATTCATCCCAGGAGGAAGAGAAAGGATATTTAGCTTCAGGACCATCATTTTCTGATTTGAAGACAGATATGTCCCTGGTTGAGTTGACTACTGTGAAAAATGAGAATTCTACTGAAGATGCTTCCAACATGCCCCATGTGACAAGCATTAAGCTTTTTGGAAGGACTGTCTCCTTGACAAATAATCAGAAGTCAGTGAATGTAGAAGAGAAAATTAAGTCAGTTATATGTAAGGAGAACTCTAGCTCTGGTGAGTCAGGATTCAACGGTTCTTTACCATGCTGGAATTTACGCCCAGGTCTTCTAGATTTAGATCTTGGGCTAAGCAACGAAATTTTAAATTTTGCACCCCTTCATCCCTCCCTCAAAGAGAGAACAATTGAGAGGGTAAGTCATTGTATTGATTCTAACGCTGAATCAGTTAACGAAATGGAAAATGGAGACAAGTTGGATGCTACTGATTCTCAATGTCAATCATCCAATCATAAGGGAGGAATCTCCCCCAAATCTCCACGAGGGTTTGTACCATATAAAAGGTGTTTGGCTGAGAGAGGTGTGAATGAATTTGTTGATGGTTTGGAAGAGAGGAAAGGGCAACGAACTCGAGTATGCTCGTAA 1278 0.4202 MEMQNQKESTMSKNSGIASNRHSDGSTKSENVVCRKDITTTGDNFTPKARKPYTITKQREKWTEEEHLKFLEALKLYGRGWHQIEEHVGTKTAVQIRSHAQKFFSKVVRESEGCTESSIKPTDIPPPRPKRKPLHPYPRNLADSFKGHSNASERSPSPNLSAVAKDTQSPTSALSAFGSEAFGSAFSEKTNRCPSPYSCTTDIHSVSLSPVRKENDCITSNSSQEEEKGYLASGPSFSDLKTDMSLVELTTVKNENSTEDASNMPHVTSIKLFGRTVSLTNNQKSVNVEEKIKSVICKENSSSGESGFNGSLPCWNLRPGLLDLDLGLSNEILNFAPLHPSLKERTIERVSHCIDSNAESVNEMENGDKLDATDSQCQSSNHKGGISPKSPRGFVPYKRCLAERGVNEFVDGLEERKGQRTRVCS 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01323 425 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Accr2g01323 425 CDD SANT 61 104 IPR001005 -
Accr2g01323 425 MobiDBLite consensus disorder prediction 114 167 - -
Accr2g01323 425 SMART sant 58 106 IPR001005 -
Accr2g01323 425 MobiDBLite consensus disorder prediction 145 167 - -
Accr2g01323 425 PANTHER SWI/SNF COMPLEX-RELATED 13 276 - -
Accr2g01323 425 Gene3D - 61 108 - -
Accr2g01323 425 FunFam protein REVEILLE 6 isoform X1 61 109 - -
Accr2g01323 425 MobiDBLite consensus disorder prediction 1 33 - -
Accr2g01323 425 Pfam Myb-like DNA-binding domain 59 102 IPR001005 -
Accr2g01323 425 ProSiteProfiles SANT domain profile. 57 108 IPR017884 -
Accr2g01323 425 MobiDBLite consensus disorder prediction 369 390 - -
Accr2g01323 425 MobiDBLite consensus disorder prediction 371 386 - -
Accr2g01323 425 SUPERFAMILY Homeodomain-like 53 107 IPR009057 -
Accr2g01323 425 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 54 108 IPR017930 -
Accr2g01323 425 NCBIfam myb-like DNA-binding domain, SHAQKYF class 57 106 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01323 Accr-Chr2 42726497 42729196 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr2g01323 Myb_DNA-binding 2.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01323 - - pcin:129319842 644.81