Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01322 ATGGCAACCACTCTTGTGCCCACTACTCCTGCAACTTCGTTACCCGTTTCTTTCCGCAACAATATTCTGAGAATCAGAATTAGTGTGGCTAACATTCGAAGCAACAGAAATTTCCCTTCCTCATCGCTCAGAAATGGCTCCTCCTTCGCGTTGGCGTCCTTACCTTCTCCTGCTTCTCAATCACCGACCCCTTCTTCCAATACCAGACCCATTTCTTCTCCTTCAACTAAGCTCTATGTCAGTGGGCTATCTTTTCGTACCACCGAAGAGAGCTTGCGAAATGCCTTTAAGAAATTTGGTGAACTTGTGGAAGTCAATTTGGTGATGGATAAAATAGCAAATAGACCAAGAGGATTTGCCTTTCTTCGTTATGCAACTGAAGAGGATTCTCAGAAGGCTATTGATGGAATGCATGGGAAGTTCTTGGATGGTAGGGTCATATTTGTGGAAGTTGCAAAACCAAGATCAGAGTTGCGCCAAAGGCTTAACCAAAGCCCTAGATATGAATGA 510 0.4412 MATTLVPTTPATSLPVSFRNNILRIRISVANIRSNRNFPSSSLRNGSSFALASLPSPASQSPTPSSNTRPISSPSTKLYVSGLSFRTTEESLRNAFKKFGELVEVNLVMDKIANRPRGFAFLRYATEEDSQKAIDGMHGKFLDGRVIFVEVAKPRSELRQRLNQSPRYE 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01322 169 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 78 147 IPR000504 GO:0003723
Accr2g01322 169 SMART rrm1_1 77 150 IPR000504 GO:0003723
Accr2g01322 169 PANTHER NUCLEOLAR PROTEIN 8 58 160 - -
Accr2g01322 169 Gene3D - 57 169 IPR012677 -
Accr2g01322 169 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 76 154 IPR000504 GO:0003723
Accr2g01322 169 SMART rrm2_1 77 150 IPR003954 GO:0003676
Accr2g01322 169 MobiDBLite consensus disorder prediction 53 75 - -
Accr2g01322 169 SUPERFAMILY RNA-binding domain, RBD 60 166 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01322 Accr-Chr2 42721603 42724103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01322 76 165 Eukaryotic Initiation Factors Gene Family AT4G34110 29.787 4.31e-10 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01322 - - qsa:O6P43_008424 180.644