LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr2g01316	ATGATCATGGCGGAGCAAACAACATCATCTTCTATCTCTTGCCAATGGACTTATGATGTGTTCCTTAGCTTCAATGGTGATGATACTCGCTTAGGTTTCATCAGTCATCTCTATGAAGCTCTGCGTCAAAGTGGAATTCATGCCTTTATTGATGATGAATTCATTAGGACAGGAGAAAAACTCACACCTGCACTTTTCAAAGCTATAGAAGAATCAAGAATAGCCCTGGTAGTTTTTTCAGAAAATTATGCAAACTCAACATTTTGTTTGGAGGAACTGGTAAAAATTTTGGACTGCTTCAAGGAAGAAGGTCGATGGATATATCCAATATTTTATTATGTGGATCCATCGGAATTGCGACGTCCAAGAGGAAGCTATGCAGAAGTATTGGCTCGATTAGAGGAACGATTCAAAGACAACAAGCACAAGGTGCAGAAATGGAGGATGGCTTTGTCTGAAGCTGCTGAACTCAAAGGCTGTCATCTCAAACCAAAGATTTCAAAAGAACAAGAGTGTATTGCAAGGATCATCAGTGATGTTGCTACTAGGATTAATCGAGAGCCTTTGCATGTTACAAATTATCCAGTTGGACTTGTATCTCGAGTGAAGGGAGTAATCTCTTGTCTAGAACTTTGGTCCACTATGGAAATTAAGATGATAGGAATTTGGGGAGCTGGTAGTATAGGCAAATCAACTATTGCAAGAGCTGTGTATAATTTGATTGCTGATAATTTTGAAGGCTTATGTTTTCTTTGCAATGTAAGAAAACAATCTAAACTGCCGAATGGTTTGTCATACCTTCAAGAGACATTATTATATAAATTAGTCATGGAGAAAGATCTCAAGTTGGGTGATTATCATGAAGGAATACCAATAATTGAACATCGGCTTAGTAAGAAGAAGATTCTTTTGATTCTTGATGATGTTGACAAATCCAACCAATTAGAAGCACTTGCTGGAAGTTGTAATTGGTTTGGCTGTGGAAGCAGAATCATCATCACCACTAGGAATAAGCAACTGCTAGTGAGTCATGATATTGATGATAAAAGCATTTATGATGTTAAGGAATTAAATGATGAGGACTCTCTAAAGTTGCTTAGTTGGTATGCCTTTAAAAAGGAAAACATGGACTCCAACTATATGGAGGTTTGCAATCGAGCAATACATTATTCATGTGGTTTTCCACTAGCTTTAGAAGTTATTGGCCCTAACTTGCGTGGTAAGGGAGTCAATTACTGGAGTAGTGCATTGGATCAGTTTGAAAAAATACCACATGAAAGAGTTTTGGAAGCCCTAAAACTAAGCTATGATACTTTAGGGGATATTGAGAAACAAGTTTTCCTTGACTTGGCTGTCTTCTTTAATGGCGAGAAATTAGAAGATGTCAATGAAATGTTGCTATGTTTACATGGAATACAACCAAAATATGCTATTGAAGTGCTAATTGACAAATCTCTCATAAAGATTGAAGGAGACCGTGTAAGAATGCATGACTTGATAGAAGATGTCGGTAAAGAGATTGTTCGACAAGAATCACCACATGAGCCAGGTGAACGTAGCAGGTTGTGGTTCTATCAGGACATTCTTCATGTGTTACAACAAGACACAGGAACTAATAAAGTTGAAGCTATAATTCTAGATTTACCTGAAGGCATGGAAGTACAATGGAGTGGAGAGGCATTCATGAAAATGACAAATCTCAAAATGCTTGTAATAAATAAAGCATGTTTTTCTGAATGTCCTAAATATCTCCCAAACAGTTTAAGGTGGTTGGAATGGAAATGGTATCCTTTCAAATTTTTACCATTCTATTTTCGCCCAACGCAGCTAGTTTATCTAGACTTGTCCTATAGTTATTGTGAATTGCTCCAACCATTGGATAAGAAGTTCCACAGTTTAAGCAGCATGATTCTTAGAAATTGTAAACTTTTACAAAATATACCAGACTTATCTGGAGCTTCAAATTTGAGAGAATTGCTGCTTGATGGTTGCACAAATTTAATTGAAATTCATGATTCTGTTGGATTTTTAAATAAATTGAGAGAATTGAGTGCCATGCGATGTAGAAACTTGAAGACTTTACCAGCCGGCCTTAGGTTGACTTCTCTTCAACATCTTAACCTCTTCGGTTGCTCAAGTCTTGAGAGTTTTCCAGAAATATTAGTCATGATGGAAGAAATGGAAACACTTGACGTAGACAAGACAGCAATCACTGAATTGCCTTATTCAATTTGCAATCTCACTGGACTTGAAATCTTAAACATGGAGGAGTGTCCTAATCTTGAGCAACTACCAGCTAGTATTTGGACATTACCAAACCTCTGGGCACTAAACGCAAATTTTTCCAAGGGAATGAGGCATTTTAGGATGTGTGAAAGTGGAGAAGAAGCAAGCTTAGATTGCTCGTCAATGTCTTTGAAATTGGAACATTTTCATTTCTCAGAATGCAATTTATCAGATGACTCTCTTGCTCTTGGTCTTCCTCACTTTCCAAATATCACACATTTGGATCTAAGTTTTAATGATTTCACAATTCTTCCAGAATGCATCAAAGGATATCACAATTTGAAATATCTCTTGTTGGATAATTGCAAGCAACTTAAGCATATTCGGGGGATGCCACCAAACTTGGAAAAATTCAGTGCCATCTGTTGCAGATCATTGACTAAGTTATCTAAAAGCAAAGTATTAAAGCAGCATAATTCACAACACTGA	2715	0.3691	MIMAEQTTSSSISCQWTYDVFLSFNGDDTRLGFISHLYEALRQSGIHAFIDDEFIRTGEKLTPALFKAIEESRIALVVFSENYANSTFCLEELVKILDCFKEEGRWIYPIFYYVDPSELRRPRGSYAEVLARLEERFKDNKHKVQKWRMALSEAAELKGCHLKPKISKEQECIARIISDVATRINREPLHVTNYPVGLVSRVKGVISCLELWSTMEIKMIGIWGAGSIGKSTIARAVYNLIADNFEGLCFLCNVRKQSKLPNGLSYLQETLLYKLVMEKDLKLGDYHEGIPIIEHRLSKKKILLILDDVDKSNQLEALAGSCNWFGCGSRIIITTRNKQLLVSHDIDDKSIYDVKELNDEDSLKLLSWYAFKKENMDSNYMEVCNRAIHYSCGFPLALEVIGPNLRGKGVNYWSSALDQFEKIPHERVLEALKLSYDTLGDIEKQVFLDLAVFFNGEKLEDVNEMLLCLHGIQPKYAIEVLIDKSLIKIEGDRVRMHDLIEDVGKEIVRQESPHEPGERSRLWFYQDILHVLQQDTGTNKVEAIILDLPEGMEVQWSGEAFMKMTNLKMLVINKACFSECPKYLPNSLRWLEWKWYPFKFLPFYFRPTQLVYLDLSYSYCELLQPLDKKFHSLSSMILRNCKLLQNIPDLSGASNLRELLLDGCTNLIEIHDSVGFLNKLRELSAMRCRNLKTLPAGLRLTSLQHLNLFGCSSLESFPEILVMMEEMETLDVDKTAITELPYSICNLTGLEILNMEECPNLEQLPASIWTLPNLWALNANFSKGMRHFRMCESGEEASLDCSSMSLKLEHFHFSECNLSDDSLALGLPHFPNITHLDLSFNDFTILPECIKGYHNLKYLLLDNCKQLKHIRGMPPNLEKFSAICCRSLTKLSKSKVLKQHNSQH	904

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr2g01316	904	SUPERFAMILY	L domain-like	509	894	-	-
	Accr2g01316	904	SMART	till_3	17	157	IPR000157	GO:0007165
	Accr2g01316	904	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	188	450	IPR027417	-
	Accr2g01316	904	Gene3D	Ribonuclease Inhibitor	517	792	IPR032675	-
	Accr2g01316	904	Gene3D	-	186	349	IPR027417	-
	Accr2g01316	904	SUPERFAMILY	"Winged helix" DNA-binding domain	427	533	IPR036390	-
	Accr2g01316	904	SUPERFAMILY	Toll/Interleukin receptor TIR domain	8	159	IPR035897	-
	Accr2g01316	904	Gene3D	-	356	440	IPR042197	-
	Accr2g01316	904	FunFam	Disease resistance protein (TIR-NBS-LRR class)	14	186	-	-
	Accr2g01316	904	Gene3D	Ribonuclease Inhibitor	796	904	IPR032675	-
	Accr2g01316	904	Pfam	TIR domain	18	183	IPR000157	GO:0007165
	Accr2g01316	904	Gene3D	-	14	185	IPR035897	-
	Accr2g01316	904	ProSiteProfiles	TIR domain profile.	16	184	IPR000157	GO:0007165
	Accr2g01316	904	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	18	774	IPR044974	GO:0006952
	Accr2g01316	904	Pfam	NB-ARC domain	214	436	IPR002182	GO:0043531
	Accr2g01316	904	PRINTS	Disease resistance protein signature	296	310	-	-
	Accr2g01316	904	PRINTS	Disease resistance protein signature	391	405	-	-
	Accr2g01316	904	PRINTS	Disease resistance protein signature	698	714	-	-
	Accr2g01316	904	PRINTS	Disease resistance protein signature	219	234	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr2g01316	Accr-Chr2	42669351	42673073	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr2g01316	18	778	WRKY Transcription Factor Family	AT4G12020	31.904	1.91e-84	295

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr2g01316	-		-	pcin:129289024	1242.25