Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01313 ATGGCCAGGGTCGGGTTGCCACCGGGTTTTCGGTTCCATCCGACCGACGAAGAGCTTGTCAATTATTATCTCAAAAGGAAGATCAATGGCCAAGAAATTGAACTTGACATCATCCCTGAGATTGATCTCTACAAATGTGAGCCTTGGGAACTTGCAGACAAGTCATTTCTGCCAAGTAGAGATCCAGAGTGGTACTTCTTTGGACCAAGAGACAGGAAATACCCAAATGGTTTCAGAACAAACAGAGCCACTAGAGCTGGGTACTGGAAGTCCACAGGCAAGGACAGAAGGGTAACTTCCCAAAACAGACCCATTGGCATGAAGAAAACTCTTGTTTACTACAGAGGCAGAGCCCCTCAAGGCATCAGAACTGACTGGGTCATGCACGAGTATCGCCTCGACGACAAAGATTCGGAGGACATCTCTGGAATACAGGATACTTATGCATTGTGCCGTGTGTTCAAGAAAAATGGGATCTGCTCTGAAATTGAAGAGCAAGGGCAGAGTAGTTTAACACTAATTGAGAGCTCACAAACCATAAACACTAACAACGAAAGCGAAACCATGTCTCCAGATCCGGCCGGGGCATCTTCGTGCTTGGAGGAGGAAGACAAAGATGATTCATGGATGCAGTTCATTACAGATGATGCATGGTATCCTTCTAATGCAGCCATGGCAGGTTGTGAAGAAGTTTCTCATCATTTTACATTCACAAATTAA 720 0.4542 MARVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEIDLYKCEPWELADKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVTSQNRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDSEDISGIQDTYALCRVFKKNGICSEIEEQGQSSLTLIESSQTINTNNESETMSPDPAGASSCLEEEDKDDSWMQFITDDAWYPSNAAMAGCEEVSHHFTFTN 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01313 239 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Accr2g01313 239 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 187 - -
Accr2g01313 239 FunFam Nac domain-containing protein 86 15 159 - -
Accr2g01313 239 MobiDBLite consensus disorder prediction 181 201 - -
Accr2g01313 239 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Accr2g01313 239 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Accr2g01313 239 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01313 Accr-Chr2 42644024 42647949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01313 1 227 NAC Transcription Factor Family AT3G17730 77.500 4.07e-131 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr2g01313 NAM 9.5e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01313 - - gmx:100784495 431.024