Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr2g01311 ATGGTAAGAAAGAAGAGGACTGAAGCTCCTAGTGGAGGTGAAAGCTCCGAGACCCATGAAAGTGGGGGAAGCGGAAGAGGTTATCAACCACGCCCTCAAGAAAGGGGTGCTCAAGGCCCGCAACAGTCAGCTGGAGGACCCCCAGGAGGTAGAGGCTGGTATCCTCAAGGAGGGCGTGGGGGTTATGGTGGAGGGCGTGGTCGTGGGTCACCCCAACAGCAGTACAGTGGCTCCCCTGATTATCAAGGCAGGGGGAGGGGAGGATCTTATCAACAGGGAGGTCGTGGTGGATACAGTGGTGGTCGAGGAGGTGCGGGCATAAGTGGACGTGGTGGAGGACCTTCATATGGCGTCCCATCCCGACCAGAAGTACCCGAGCTGCACCAAGCAACCTCAGCTTCATATCAAGCTGGGGTGACTCCTCAGTCTGAGATACCTGAGGCCAGTTCTGTTTCACAACTTCCTGAGCCAACACAGTTGGAACAGCAAACTAAGCAGTTAACTATTCATTCAGAAGCTGCTTCTGCCCCGCCTGCCTCTAGTAAATCAGTGAGGTTTCCCCTTCGGCCTGGAAAGGGTACCTATGGCACAAAGTGTATTGTGAAAGCTAATCACTTCTTTGCTGAGTTACCTAACAAAGATCTTCACCAGTATGATGTAACCATAACTCCAGAAGTGCCATCCAGAGGTGTAAACCGTGCTGTTATGGAGCAGCTGGTTAAGCTGTACCGTGAGTCTCATCTAGGCATGAGACTACCTGCATATGACGGTCGCAAGAGCCTGTACACTGCTGGCCCTCTTCCTTTTGTTTCAAATGAGTTCAGAATCACTCTCATTGATGAAGAGGAAGGAGGAGGAGCAGGAGTTCAAAGGAGAGTTAGGGATTTCAAAGTTGTGATAAAATTAGCTGCCCGAGCTGACCTTCACCACTTAGGAATGTTTTTGCAAGGAAGACAAACTGATGCACCTCAGGAAGCCCTTCAGGTTCTTGATATTGTTCTGCGTGAACTACCTACCTCTAGGTATTGTCCTGTCGGAAGATCTTTCTATTCACCTGATATAGGTAGGAGGCAACCGTTAGGTGAGGGATTGGAGAGCTGGCGTGGGTTTTATCAGAGTATTCGTCCAACCCAGATGGGATTATCACTCAACATTGATATGTCATCAACAGCGTTTATAGAACCACTGCCAGTAATTGATTTTGTGACTCAGCTGCTGAACAGGGATGTCACTGCCCGTCCATTATCTGATGCTGATCGTGTAAAGATCAAAAAAGCCCTTCGTGGTGTCAAAGTTGAAGTAACGCATCGTGGTAACATGAGAAGGAAATATCGCATCTCTGGCCTGACATCACAGGCAACTAGAGAGCTGACATTCCCTGTTGATGAGAGGGGGACTGTGAAATCTGTTGTGGAGTATTTTTATGAGACATACGGATTTGTCATTCAACATACTCAGTGGCCTTGCTTACAAGTGGGAAATACTAATAGACCGAACTATCTTCCAATGGAGGTTTGCAAGATTGTAGAAGGTCAAAGGTACTCTAAGAGGTTGAATGAGAGGCAGATTACTGCTTTGCTCAAAGTCACCTGTCAGCGACCTGTTGATAGGGAGCGGGATATCATGCAGACGGTTCATCATAATGCTTACCGTGAAGATCCTTATGCTAGAGAGTTTGGGATCAAAATCAGTGAGAAACTTGCTCAAGTTGAAGCACGCATTCTTCCTGCACCCTGGCTGAAGTATCATGATACAGGAAGAGAAAAGGATTGCCTTCCTCAAGTTGGCCAATGGAATATGATGAATAAGAAAATGGTCAATGGGGGGACTGTTAACCACTGGATCTGCATAAATTTTTCAAGGAATGTTCAAGAGAGTGTGGCCAGTGGCTTTTGTTATGAACTTGCACAGATGTGTTATATATCTGGCATGGCATTTAATCCGGAGCCAGTAATTCCTGTGTTCACTGCCCGCCATGACCATGTTGATAAAGTTCTGAAATCACGCTATCATGATGCCAAGGGAAGGCTAAAGGATAAGGAGCTTGATCTGCTTATTGTTATTTTGCCTGATAATAATGGCTCTCTTTATGGTGATCTGAAACGTATCTGTGAGACGGATCTTGGGGTTGTTTCCCAGTGCTGTTTGACAAAACATGTCTTTAAAATGAACAAGCAGTACCTTGCAAATGTTGCATTAAAAATCAATGTGAAGGTTGGTGGAAGGAACACAGTGCTTGTTGATGCACTTTCAAGACGCATACCTTTAGTTGGCGACCGACCCACAATTATATTTGGAGCTGATGTTACTCATCCACACCCTGGGGAGGATTCTAGTCCATCTATAGCAGCTGTTGTGGCTTCTCAAGATTGGCCTGAAATTACCAAATATTCTGGTTTGGTTTGTGCTCAAGCACACAGGCAGGAGCTTATCCAAGACCTTTTCAAACAGTGGCAAGATCCAGCGAGGGGGACAGTAACTGGTGGAATGATAAAGGAGCTTCTCATATCTTTTCGAAGAGCTACAGGGCAGAAGCCACAGCGCATCATATTTTACAGGGATGGTGTGAGTGAAGGACAGTTTTATCAAGTTTTACTTTTTGAGCTTGATGCTATCCGCAAGGCATGTGCATCATTAGAACCTAACTATCAGCCTCCTGTCACTTTTGTGGTGGTTCAAAAGCGTCATCACACGAGGCTGTTTGCTAACAACCATCATGATCGGAATTCAATTGACCGTAGTGGGAACATATTGCCTGGTACTGTTGTGGACTCCAAAATTTGTCATCCAACTGAGTTTGACTTCTATCTTTGTAGCCATGCTGGGATACAGGGTACAAGTCGACCTGCCCATTACCACGTGTTGTGGGATGAAAACAATTTTACTGCCGATGCACTTCAGACGCTGACTAATAACCTCTGCTACACTTATGCAAGATGCACACGATCGGTTTCAATTGTGCCTCCTGCATACTATGCGCATTTGGCTGCTTTCCGAGCTCGATTTTATATGGAACCGGCCACATCAGATAGCGAGTCAATGAGTGCTGCTGCTGGACGTGGAGCGGGTGTTGGTGCAGGACGTAGCACTCGTGCACCGGGTGCAAGTGCTGCGGTCAGGCCTCTTCCTGCTCTTAAAGAGAATGTGAAGAGGGTCATGTTTTATTGCTAA 3171 0.4661 MVRKKRTEAPSGGESSETHESGGSGRGYQPRPQERGAQGPQQSAGGPPGGRGWYPQGGRGGYGGGRGRGSPQQQYSGSPDYQGRGRGGSYQQGGRGGYSGGRGGAGISGRGGGPSYGVPSRPEVPELHQATSASYQAGVTPQSEIPEASSVSQLPEPTQLEQQTKQLTIHSEAASAPPASSKSVRFPLRPGKGTYGTKCIVKANHFFAELPNKDLHQYDVTITPEVPSRGVNRAVMEQLVKLYRESHLGMRLPAYDGRKSLYTAGPLPFVSNEFRITLIDEEEGGGAGVQRRVRDFKVVIKLAARADLHHLGMFLQGRQTDAPQEALQVLDIVLRELPTSRYCPVGRSFYSPDIGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVTARPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTVKSVVEYFYETYGFVIQHTQWPCLQVGNTNRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVDRERDIMQTVHHNAYREDPYAREFGIKISEKLAQVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNHWICINFSRNVQESVASGFCYELAQMCYISGMAFNPEPVIPVFTARHDHVDKVLKSRYHDAKGRLKDKELDLLIVILPDNNGSLYGDLKRICETDLGVVSQCCLTKHVFKMNKQYLANVALKINVKVGGRNTVLVDALSRRIPLVGDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYSGLVCAQAHRQELIQDLFKQWQDPARGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHHDRNSIDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADALQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPATSDSESMSAAAGRGAGVGAGRSTRAPGASAAVRPLPALKENVKRVMFYC 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr2g01311 1056 SUPERFAMILY PAZ domain 200 546 IPR036085 GO:0005515
Accr2g01311 1056 Pfam PAZ domain 400 525 IPR003100 GO:0005515
Accr2g01311 1056 FunFam Protein argonaute-2 389 515 - -
Accr2g01311 1056 Pfam N-terminal domain of argonaute 198 334 IPR032474 -
Accr2g01311 1056 Gene3D paz domain 389 514 - -
Accr2g01311 1056 CDD PAZ_argonaute_like 395 509 - -
Accr2g01311 1056 Pfam Argonaute linker 1 domain 344 394 IPR014811 -
Accr2g01311 1056 FunFam protein argonaute 10-like 753 1056 - -
Accr2g01311 1056 SMART DUF1785_2 343 395 IPR014811 -
Accr2g01311 1056 Pfam Mid domain of argonaute 593 668 IPR032473 -
Accr2g01311 1056 MobiDBLite consensus disorder prediction 1 165 - -
Accr2g01311 1056 ProSiteProfiles Piwi domain profile. 684 1005 IPR003165 GO:0003676
Accr2g01311 1056 ProSiteProfiles PAZ domain profile. 396 510 IPR003100 GO:0005515
Accr2g01311 1056 Pfam Piwi domain 685 1004 IPR003165 GO:0003676
Accr2g01311 1056 Gene3D - 753 1056 IPR036397 GO:0003676
Accr2g01311 1056 SMART PAZ_2_a_3 400 532 IPR003100 GO:0005515
Accr2g01311 1056 Pfam Glycine-rich region of argonaut 77 176 IPR024357 -
Accr2g01311 1056 CDD Piwi_ago-like 554 1004 IPR045246 -
Accr2g01311 1056 MobiDBLite consensus disorder prediction 127 165 - -
Accr2g01311 1056 SMART Piwi_a_2 684 1005 IPR003165 GO:0003676
Accr2g01311 1056 FunFam Argonaute 10 574 747 - -
Accr2g01311 1056 Pfam Argonaute linker 2 domain 536 582 IPR032472 -
Accr2g01311 1056 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 175 1006 - -
Accr2g01311 1056 Gene3D - 574 747 - -
Accr2g01311 1056 SUPERFAMILY Ribonuclease H-like 670 1006 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr2g01311 Accr-Chr2 42594635 42600602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr2g01311 80 1056 Eukaryotic Initiation Factors Gene Family AT1G48410 81.015 0.0 1604
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr2g01311 K11593 - gmx:100780375 1717.59